Gene Dshi_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0351 
Symbol 
ID5711260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp334651 
End bp335166 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content70% 
IMG OID641266249 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001531701 
Protein GI159042907 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.988966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCC TGACCACCGA CCGGCTGATC CTGCGCCCGC CCGCGGCGCG AGACTTCCCC 
GGCTACCGCG ATTTCTACAT GTCCGACCGG TCGCGCCACG CCCATGGCCC GCTGAGCGAA
GATCAGGCGT GGTACGCCTT CTGCGTCGAG ATGGCCCATT GGCCCATGCG CGGCTTTGGC
ATGTTCACCC TGCTGACCCA GGCCGATCCG GAAACCCCAA TCGGCCTCGT CGGCCCGTGG
TTCCCCGCCG ACTGGCCCGA GCGTGAAGTC GGCTGGCTGC TCTGGCCCGG CGCCGAGGGC
CGCGGCTATG CCGACGAGGC AGCCCGCGCC TGCCTGACCC ATGCCTTCGG ACACCTGGGC
TGGGACACGG CCGTCAGCTA TATCGCACCC GAAAACGCCC CATCCGCCAA ACTGGCGGAG
AAACTCGGCG CGCATCCGGA CCCTGACGCC AAGGCCCCCA AGCCGGGCCT CGATGTCTGG
CGCCACGACC CGGCCCTCTG GCACGAGGCC GCCTGA
 
Protein sequence
MTLLTTDRLI LRPPAARDFP GYRDFYMSDR SRHAHGPLSE DQAWYAFCVE MAHWPMRGFG 
MFTLLTQADP ETPIGLVGPW FPADWPEREV GWLLWPGAEG RGYADEAARA CLTHAFGHLG
WDTAVSYIAP ENAPSAKLAE KLGAHPDPDA KAPKPGLDVW RHDPALWHEA A