Gene Dshi_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0350 
Symbol 
ID5711259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp334046 
End bp334651 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID641266248 
Producthypothetical protein 
Protein accessionYP_001531700 
Protein GI159042906 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATC GCGACATCCC CGTGCTGGAA ACCCGGCGCC TGGCCCTGCG TGGCCCCGTG 
CCGGAGGATT ACCCGAACTT CAAGGCAACC TTCGCCTCCT ACCGGTCGCG CTTCATGGGC
GGGCCGCTGA ACGCCTACGA GACCTGGATG CTCTACGCCG CCGAGATCGG CCATTGGGAG
ATCCGCGGCT TCGGCATGTG GATGATCCAC GACAAGGCGA CCGACGAGAC CTATGGCATG
GCCGGGGGCT GGCAGCCCGC GAAATGGCCC GAGCGCGAGA TCGCCTGGAT CATCTGGCCC
GAGAAATCCG GCCACGGCTT CGCCCTGGAG GCGGTCCATG CCTGCCGCCG CTACTATTAC
GACCAGCGCG GCTGGGACGG GGCGGTCAGC TATCTCGACC CGATGGATCT CGACAGCATC
CGGCTGGCCG AGCGGCTCGG CGCGGCCAAG GACAAGGCGG CGGCCACGGT GACGGGCGAC
GACGTGGTCT ATCGCCACCC GGCCCCCGCC GCCCTGCGCG GCAGCCAGCT CGCCCACGGC
ATCGAGATGG AGATCGGCCA TTACGCCGAC CCGCTGTTCA AACCGAAAGG ATACGCCCTT
GACTGA
 
Protein sequence
MGHRDIPVLE TRRLALRGPV PEDYPNFKAT FASYRSRFMG GPLNAYETWM LYAAEIGHWE 
IRGFGMWMIH DKATDETYGM AGGWQPAKWP EREIAWIIWP EKSGHGFALE AVHACRRYYY
DQRGWDGAVS YLDPMDLDSI RLAERLGAAK DKAAATVTGD DVVYRHPAPA ALRGSQLAHG
IEMEIGHYAD PLFKPKGYAL D