| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0348 |
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| Symbol | rpsP |
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| ID | 5711257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 333195 |
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| End bp | 333587 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266246 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_001531698 |
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| Protein GI | 159042904 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.409414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGA AAATCCGGCT CGCCCGCGGC GGCTCCAAGA AGCGCCCCTT CTACCGTATC
GTGGCCGCGG ACAGCCGCAT GCCCCGCGAC GGACGCTTCA TCGAGAAGCT CGGCACCTAC
AACCCGCTCC TGCCCAAGGA CAGCGAAGAC CGCGTGAAGA TGGACCTGGA GCGCGTGCAG
TACTGGCTGG GCGAAGGCGC CAAGCCGACC GACCGCGTGG CGCGGATGCT GGAGGCCGCC
GAGGTGCTGC CCAAGACCGA GCGCAACAAC CCCAAGAAGG CCGTGCCGGG CAAGAAGGCC
CAGGACCGCG CCGAGGAAAA GGCCGCCAAG GCCGCGGAAG CCTCCGAAGC GCCCGCCGAT
GAGGCCCCCG CCGAAGAGGC CGCTGCCGAG TAA
|
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| Protein sequence | MAMKIRLARG GSKKRPFYRI VAADSRMPRD GRFIEKLGTY NPLLPKDSED RVKMDLERVQ
YWLGEGAKPT DRVARMLEAA EVLPKTERNN PKKAVPGKKA QDRAEEKAAK AAEASEAPAD
EAPAEEAAAE
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