Gene Dshi_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0346 
Symbol 
ID5711255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp332071 
End bp332535 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID641266244 
Productprotein of unknown function DUF55 
Protein accessionYP_001531696 
Protein GI159042902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.309429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGT ACTGGATCGG ATTGGCCGAG CGCGACAGCG TGCAGGCGGC TGTTGCAAAC 
GGGGTTTGCT TGTTCTCGGG CGGCAAGGCG GCGGCCGTGC GCAAGCTCGC GCCGGGGGAT
TGGGTGCTCT ATTACTCGCC TCACGAGACC GCCGATGGCG CGGCACTGGA ATGTTTCACC
GCCGTGGGCG AGGTGATCGA CGACACGCCC TGGACCCAGA ACTGGACGCA GCTTTGCGCG
GGCGGGCCGT CCTGGACCTT TGGCACGGGC CGGGGGTCGG GCCAGACCTG GGTGCGCAAA
TGCGCCTATG ACGCGGTGGG CGAGGTGTCG GTGCGGCCCC TGCTCGGCGC GCTCGACTTC
GTGGCCCGGC CGCGCCACTG GGGCCGGACA TTCCGGCGCG GGCAGATGGA GATCGGGGCG
GCGGATTTCT TCGCCATCGC GGACCGTTTG CGTGCGGTGG CCTGA
 
Protein sequence
MARYWIGLAE RDSVQAAVAN GVCLFSGGKA AAVRKLAPGD WVLYYSPHET ADGAALECFT 
AVGEVIDDTP WTQNWTQLCA GGPSWTFGTG RGSGQTWVRK CAYDAVGEVS VRPLLGALDF
VARPRHWGRT FRRGQMEIGA ADFFAIADRL RAVA