| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0342 |
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| Symbol | trmD |
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| ID | 5711251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 329524 |
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| End bp | 330321 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641266240 |
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| Product | tRNA (guanine-N1)-methyltransferase |
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| Protein accession | YP_001531692 |
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| Protein GI | 159042898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC CTCCCAACCG CTCCCACGGC CGGAAATCCA TCTCGGCCAC GCTGACGCCT
CAGGATCTGA TGGCGGCGCG TCCCCGGCTG AAGGGGGCGT GGACCGCCAA GGTGCTCACG
CTGTTTCCCA AGGCCTTCCC GGGCGTTCTG GGCGAGAGCC TGACGGGCAA GGCGCTGGAC
GAAGGGCTCT GGGCGCTGGA GGCGATGGAT CTGCGCAGCT TCGGGGTGGG CAAGCACCGC
AATGTGGACG ACACGCCCGC AGGCGGCGGG GCGGGCATGG TGCTGCGCCC GGATGTGCTG
GGCCGGGCGA TCGACGCCGC GCGCGCAGGC ACGCCGGAGG CGCCGGAGGA CTGGCCCATC
GTCTATCTCA GCCCCCGGGG CGCGCCCTTT ACCCAAGCCT GGGCGCGGGC CTGGTCGCGG
GCACGGGGGG TGACGCTGCT ATGCGGGCGG TTCGAGGGGG TGGATCAGCG GGTGCTCGAC
CACTACCCGA TCGAGGAGGT CAGCCTGGGG GATTTCGTGC TCACCGGCGG CGAGTTGGCC
GCACAGGCCA TGATCGACGC CACGGTGCGG CTGCTGCCCG GGGTTCTGGG CAACGCGGCC
TCGACGGAGG AGGAAAGCTT CTCCCGGGGC CTGCTGGAGC ATCCGCAATA CACCCGGCCC
GCGGTCTGGA AGGGCCGCGC GATCCCCGAG GTGCTGATGT CCGGGCATCA CGGCCAGATC
GAGGCCTGGC GCCGGGAGCA GGCGGAAGCC CTGACCCGCG CGCGGCGTCC CGACCTCTGG
GCTGCGCGCA AGCCCTGA
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| Protein sequence | MTTPPNRSHG RKSISATLTP QDLMAARPRL KGAWTAKVLT LFPKAFPGVL GESLTGKALD
EGLWALEAMD LRSFGVGKHR NVDDTPAGGG AGMVLRPDVL GRAIDAARAG TPEAPEDWPI
VYLSPRGAPF TQAWARAWSR ARGVTLLCGR FEGVDQRVLD HYPIEEVSLG DFVLTGGELA
AQAMIDATVR LLPGVLGNAA STEEESFSRG LLEHPQYTRP AVWKGRAIPE VLMSGHHGQI
EAWRREQAEA LTRARRPDLW AARKP
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