Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0322 |
Symbol | |
ID | 5711572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 310800 |
End bp | 311300 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266218 |
Product | putative phosphatase |
Protein accession | YP_001531672 |
Protein GI | 159042878 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2062] Phosphohistidine phosphatase SixA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.629623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.448063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAC TTCTTCTCAT GCGACACGCC AAGTCGAGCT GGGCCGAGCC CGGGCGCGAC GACCACAGCC GCCCCCTGAA CGGACGCGGG CGGCGCGGGG CCGAGGCCCT GGGCCGCTGG ATCCGCGACA ATGACCTGGT CCCGGACGAA GTGCTGTGCT CCGACGCGGC GCGCACCCGG GAAACCTGGC GGCGTCTCGA TCTGCCGGGC GAGGTGACGC TGGACCGAGC ACTCTATCAT GCCGAAGGCG CGGCCCTGAT GGCGCGCCTG CAGCAGGCAA CCGGGGACCG GGTCCTGATG ATCGCCCATA ACCCGGGCAT CGCCGAGTTC GCCAGCCGCC TGACACCGGA CCGGCCCGAG CATCCGCGCT TCGCCCAGTA CCCGACCGGG GCGACCACGG TGCTGCACTT CCCCATCGCG GAATGGGCGG CCCTTGAATG GGACACGGGG CGCCTTGCGT CTTTCGTGAT CCCCGCCGAT CTGGGCGTGA CCCGGACATG A
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Protein sequence | MKTLLLMRHA KSSWAEPGRD DHSRPLNGRG RRGAEALGRW IRDNDLVPDE VLCSDAARTR ETWRRLDLPG EVTLDRALYH AEGAALMARL QQATGDRVLM IAHNPGIAEF ASRLTPDRPE HPRFAQYPTG ATTVLHFPIA EWAALEWDTG RLASFVIPAD LGVTRT
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