| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0312 |
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| Symbol | luxI |
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| ID | 5711562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 301032 |
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| End bp | 301619 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641266208 |
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| Product | N-acyl-L-homoserine lactone synthetase-like protein |
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| Protein accession | YP_001531662 |
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| Protein GI | 159042868 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.434992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAACCA CCACGCTTTC GTTCGAGAAC CTTCACAACC ATGGCGAGTT ATTCGCAAAT
CTCTTTCGCG CGAGGCGACA GTCCTTCATT GTTCAGAACA AATGGGACCT GCCCGAGGCG
ATGGGGATGG AGTACGACCA GTACGACACG CCCGCGAGCC GCTGGGTCGC CGTGCACGAA
TTCGGCGAGG TTTATGCCGG TATCCGGCTG ACGCCCACCA CGGCGCGCTG CGGGATCTAT
ACCTACATGA TCCGGGACGC CCAGATGGGG CTGCTCGACA CCATCCCGCA GGACCTGCTC
TATGGGCCTG CGCCGGTGGA TGAGAGCGTC TGGGAATCGA GCCGCGTCTT CGTCTCGCAC
ACCACGCCGC AGAAGCTGCG CCGCCGGGTC CATGCCTGCC TGATCAGCGA GATGACCAAG
GCCGCGCGGG AGCATGGCGC GTCCAGGGTG CTGGGGCTCG TCCCGGCGGT CTGGACCCGT
TTCGCGGACC GGCTGGGCCT GGATATCGAG CCGGCCGGGC GGGTGATGGA GCTAGACGGG
ATCGACAACC AGTGCGTGTC GATCGACCTG ACCCGCAAGC TGCACTAG
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| Protein sequence | MQTTTLSFEN LHNHGELFAN LFRARRQSFI VQNKWDLPEA MGMEYDQYDT PASRWVAVHE
FGEVYAGIRL TPTTARCGIY TYMIRDAQMG LLDTIPQDLL YGPAPVDESV WESSRVFVSH
TTPQKLRRRV HACLISEMTK AAREHGASRV LGLVPAVWTR FADRLGLDIE PAGRVMELDG
IDNQCVSIDL TRKLH
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