Gene Dshi_0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0292 
Symbol 
ID5711542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp289461 
End bp290186 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID641266188 
Producthypothetical protein 
Protein accessionYP_001531642 
Protein GI159042848 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGGC CGTATAGGCC CCCCAGAGAC CCATGGCAAG CCCGCATTTC CCTGTTTTCC 
AAGGGGTGCG TCGGGTTGCC GACCCAGACC CGGAAAGGAA GGCCCATGCC CGCGATCACT
TCTCTCTTCG TCACCCGGCT CTACCGCGCG CAACTGGCCG AGTTCGGACC CGCCCTGGAC
CCGGGCGAGC TGGAGAAATC CTGCCTCGTG ATCGCCGAAG ATGACGATGC CGGACAGGAC
TGGTGCGAGC AGAACGGCTA TCCCGGCTAC ACCTCCTACG CGTCGCTCAC AGACCTGCCC
TGGCGCTTCC CGATCTTCGC CGATCTCGTC AAGGCGCTCG ATGCCCATGT CGCCGCCTTC
GCCGAGGATC TCGCCTTCGA CCTCGATGGC CGCGCGCTGA AACTCGAAGA CATCTGGATC
AACATCCTGC CCCAGGGCGG GATGCATGCG AGCCACATCC ACCCCCATTC GGTGATCTCC
GGCACCACCT ACGTGGCCAT GCCCGAAGGC ACCTCCGCCC TGAAACTCGA AGACCCCCGG
TCGGCCCGCA TGATGGCCGC CCCCGCCCGG CTGAAAGACG CCCCCGAAGA CCTGCAAACC
TTCGTCTACG CCAAACCGGC CGTCGGCGAT GTCCTCCTGT GGGAGAGCTG GCTCCGCCAC
GAGGTCCCAA TGAACATGGC CGAGGAAGAA CGCATCTCCG TCAGCTTCAA TTACGCCTGG
GCATAG
 
Protein sequence
MRGPYRPPRD PWQARISLFS KGCVGLPTQT RKGRPMPAIT SLFVTRLYRA QLAEFGPALD 
PGELEKSCLV IAEDDDAGQD WCEQNGYPGY TSYASLTDLP WRFPIFADLV KALDAHVAAF
AEDLAFDLDG RALKLEDIWI NILPQGGMHA SHIHPHSVIS GTTYVAMPEG TSALKLEDPR
SARMMAAPAR LKDAPEDLQT FVYAKPAVGD VLLWESWLRH EVPMNMAEEE RISVSFNYAW
A