| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0287 |
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| Symbol | rplV |
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| ID | 5711537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 286537 |
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| End bp | 286917 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641266183 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001531637 |
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| Protein GI | 159042843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTAAGG ACAAGAATCC CCGCCGCGTG GCTGAGAACG AGGCGATGGC CAAGACGCGC
ATGCTGCGCA CCTCGCCGCA GAAGCTCAAC CTCGTCGCGC AGATGATCCG GGGCAAGAAG
GTCGACAAGG CGCTTGCCGA TCTGACCTTC TCGCACAAGC GGATCGCCGT GGACGTGAAG
AAGTGCCTTC AATCCGCGAT CGCCAATGCC GAGAACAACC ATGGGCTGGA CGTCGACGAG
CTGATCGTCG CGGAAGCCTG GGTCGGCAAG AACCTGACCA TGAAGCGCGG GCGTCCCCGG
GCCCGTGGCC GGTTCGGCAA GATCATCAAG CCCTTTGCGG AAATCACCAT CAAGGTCCGT
CAAGTTGAGG AGCAGGCATA A
|
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| Protein sequence | MGKDKNPRRV AENEAMAKTR MLRTSPQKLN LVAQMIRGKK VDKALADLTF SHKRIAVDVK
KCLQSAIANA ENNHGLDVDE LIVAEAWVGK NLTMKRGRPR ARGRFGKIIK PFAEITIKVR
QVEEQA
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