| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0276 |
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| Symbol | rplC |
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| ID | 5711526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 279295 |
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| End bp | 280134 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266172 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001531626 |
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| Protein GI | 159042832 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.948053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTG GAGTGATTGC AAAGAAGGTG GGCATGACCC GCCTGTTCAT GGAAGACGGC
AAGCAGGTGC CCGTCACCGT GCTGCAGCTG GACAAGCTGC AGGTGGTGGC ACAGCGCACC
GCCGAGAAGG ACGGCTACTC GGCCGTGCAA CTCGGGGCGG GGACGGCCAA GGCCAAGCGG
ACGACGAAGG CCATGCGCGG CCATTTCGCC GCCGCCTCGG TCGAGCCCAA GCGCAAGGTT
GCGGAATTCC GCGTGGCGCC CGAGAACCTG ATCAATGTCG GTGAGGAAAT CACCGCCGAT
CATTACTTCG AAGGCCAGTA CGTGGATGTC TCCGGCACCT CGATCGGCAA AGGCTTTGCC
GGTGCGATGA AGCGGCACAA TTTCGGCGGC CTGCGGGCCT CCCACGGTGT GTCGATCTCG
CACCGCTCGC ACGGCTCCAC CGGTCAGTGC CAGGACCCTG GCAAGGTGTT CAAGGGCAAG
AAGATGGCCG GCCACATGGG CGCTGCGCGG GTGACCACGC AGAACCTGCA GGTCGTGCGC
ACCGATGCCG ATCGCGGCCT GATCATGATC AAGGGCGCTG TCCCGGGATC GAAGGGTGGC
TGGGTGACGA TCAAGGACGC GGTGAAGAAG CCCGTGCCCG AGAACGTGAT CCTGCCCGCG
GCGCTGAAGT CCGCGGCCGA AGAGGCCAAG CGTCTGGCCG AGGAAGCTGC CGCCGCGGCG
GAAGCCGAAG CGAAGGCTGC TGAGGAGGCT GCGGCCGCCG AAGCGGCTGC TGCCGAGGAA
GCCGCTCTGA AACAGGCCGA GGCTCAGATC GAAGCCGAGA AGAAGGAAGG TGACGAATGA
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| Protein sequence | MRSGVIAKKV GMTRLFMEDG KQVPVTVLQL DKLQVVAQRT AEKDGYSAVQ LGAGTAKAKR
TTKAMRGHFA AASVEPKRKV AEFRVAPENL INVGEEITAD HYFEGQYVDV SGTSIGKGFA
GAMKRHNFGG LRASHGVSIS HRSHGSTGQC QDPGKVFKGK KMAGHMGAAR VTTQNLQVVR
TDADRGLIMI KGAVPGSKGG WVTIKDAVKK PVPENVILPA ALKSAAEEAK RLAEEAAAAA
EAEAKAAEEA AAAEAAAAEE AALKQAEAQI EAEKKEGDE
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