| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0271 |
|---|
| Symbol | rpsL |
|---|
| ID | 5711521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 274606 |
|---|
| End bp | 274977 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641266167 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001531621 |
|---|
| Protein GI | 159042827 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.377555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGA TTCAACAGCT GATCCGCAAG CCGCGGCAGC CCAAAGTAAA ACGCTCCAAG
TCCCAGCACC TGGAGAGCTG CCCGCAGAAG CGCGGCGTCT GCACGCGGGT CTACACGACC
ACGCCGAAGA AGCCGAACTC GGCCATGCGG AAAGTCGCGA AAGTGCGCCT GACCAACGGG
TTTGAGGTGA TCAGCTATAT TCCCGGGGAA AGCCACAACC TCCAGGAGCA CTCCGTGGTC
CTGATCCGGG GTGGTCGCGT CAAGGACCTT CCGGGTGTGC GTTACCACAT CCTGCGCGGT
GTTCTGGATA CCCAGGGCGT CAAAGATCGT AAGCAACGCC GTTCGAAGTA CGGCGCGAAG
CGTCCGAAGT AA
|
|---|
| Protein sequence | MPTIQQLIRK PRQPKVKRSK SQHLESCPQK RGVCTRVYTT TPKKPNSAMR KVAKVRLTNG
FEVISYIPGE SHNLQEHSVV LIRGGRVKDL PGVRYHILRG VLDTQGVKDR KQRRSKYGAK
RPK
|
|---|
| |