| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0253 |
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| Symbol | |
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| ID | 5712179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 251200 |
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| End bp | 252759 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266149 |
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| Product | putative Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| Protein accession | YP_001531603 |
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| Protein GI | 159042809 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT ACCGCAGTCC GTTCGCGGAT GTGACGGTGC GCGACCTGTC GATCACCGAG
GCGTTGTTCG AGGGGTTGGC AAGGCGCGGC GATGCCCCGA TCCTGATCGA CGGGCCGAGC
GGCGCGGCGA TGACGGGCGC GCAGCTGGAA GGGCGGATCC GGGCCTGCGC GGGCGGGTTG
CGGGCGCGCG GGATCGGGCC GGGGGATGTC GTGGCGATCA TGGCGCCGAA CATGCCCGAC
TATGCCACGG CCTTTCATGG CGCGGCCTTT GCCGGGGCGA CGGTCACCAC CCTGAACCCG
ACCTACACCA CCGAGGAAGC GGCCCACCAG CTGCGCGACA GCGGCGCGCA GATGCTGGTC
ACCGTGCCGG CCTTCGCCGA TCTGGCCGCT GAGGCGGTGC AGGGCACGGG CGTCACCGAG
ACGGTGATGA TGGGCACGAC CGGGCCCGGG TCGCTGGAGG CGCTGTTCGG CCCGCCCCTG
GCGGCGCAGG TGGCGGTGGA TCTTGCGCGG GATATCGTGG TGCTGCCCTA TTCGTCCGGG
ACCACGGGGC TGCCCAAGGG GGTGATGCTG AGCCACAGGA ACCTTGTGGT GAACGTGGAT
CAGACAGCAG AGATCATCGG CATCACGGTG CAGGATGTGA CCGTGGGGTT CCTGCCGTTC
TTCCACATCT ACGGGATGAC GGTCTTGATG AACTGCTACC TGTCCCGGGG CGCGGCTGTT
GTGACCATGC CACGCTTCGA TCTGGAGCAG TTTTTGTCCC TGTGTCAGAC CCACCGGCCT
CGGCAGCTTT ACATCGCGCC GCCCGTGGCG CTGGCGCTGG CGAAGCATCC CATGGTGGAT
GACTACGACC TGTCGGGGGT GGAGTTCATC CTTTCCGGGG CGGCCCCGCT GGGCGGCGAT
GTGGCCGAGG CGGTCGGGCG GCGGTTGGGC GTCGAGATGG TGCAGGGCTA TGGGATGACC
GAGATGAGCC CGGTTTCCCA TTTCACCCCG CCGGGGCAGA ATGTGCCGGG CTCGGTCGGG
CCGACCGCGC CCAGTGCCGA GAGCCGGATC GTCGATCCCG AGACCGGGGA GGATGCCGCG
GAGGGTGAGG TCTGGGTCCG GGGGCCGCAG ATCATGCAGG GCTATCTCAA CCGACCCGAT
GCCACGGCCG AGACCGTGAC GCGTGATGGC TGGTTGAAGA CCGGCGATCT GGGCCGGTTC
GACGAGGCGG GCAACCTGTT CATCACCGAC CGGGTGAAGG AGTTGATCAA GGTCAGCGGG
TTCCAGGTCG CCCCGGCGGA GTTGGAGGCG GTGCTGCTGA CCCATCCGGC GATCACGGAC
GCGGCGGTGA TCGGCGTACC GGACGACTCG GCGGGCGAGC GGCCCATGGC CTTCGTGGTG
CGCAGCGATC CGGATCTGAG CGAGGGGGCG GTGATCGCCC ATGCGGCGGA GCATCTGGCG
CATTACAAGC GGATCGCGCG GGTGGCCTTT GTCGAGGCGG TGCCGAAATC CGCCTCGGGC
AAGATCCTGC GGCGGCTCTT GCGGGCAAAG GTCGGGGAGG ACATGGCGAC CGGTGCCTGA
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| Protein sequence | MKIYRSPFAD VTVRDLSITE ALFEGLARRG DAPILIDGPS GAAMTGAQLE GRIRACAGGL
RARGIGPGDV VAIMAPNMPD YATAFHGAAF AGATVTTLNP TYTTEEAAHQ LRDSGAQMLV
TVPAFADLAA EAVQGTGVTE TVMMGTTGPG SLEALFGPPL AAQVAVDLAR DIVVLPYSSG
TTGLPKGVML SHRNLVVNVD QTAEIIGITV QDVTVGFLPF FHIYGMTVLM NCYLSRGAAV
VTMPRFDLEQ FLSLCQTHRP RQLYIAPPVA LALAKHPMVD DYDLSGVEFI LSGAAPLGGD
VAEAVGRRLG VEMVQGYGMT EMSPVSHFTP PGQNVPGSVG PTAPSAESRI VDPETGEDAA
EGEVWVRGPQ IMQGYLNRPD ATAETVTRDG WLKTGDLGRF DEAGNLFITD RVKELIKVSG
FQVAPAELEA VLLTHPAITD AAVIGVPDDS AGERPMAFVV RSDPDLSEGA VIAHAAEHLA
HYKRIARVAF VEAVPKSASG KILRRLLRAK VGEDMATGA
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