Gene Dshi_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0244 
Symboladh 
ID5712170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp241950 
End bp243065 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content71% 
IMG OID641266140 
Productalanine dehydrogenase 
Protein accessionYP_001531594 
Protein GI159042800 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.360357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GTTGCCCGAC AGAGATCAAG CCCCAGGAAT TCCGTGTCGG GCTCACCCCC 
GCTGCCGCGG CCGAGGCCGT CGCCCATGGC CACGCGGTGC TGGTGCAGGC GGGCGCTGGT
GTCGGCTCGG GGTTCGAGGA TGCCGACTAC ATCGCCGCCG GGGCGCGGAT CGTGGACACC
GCCGAGGAGG TCTTCGCCAA GGCCGACATG GTCGTGAAGG TTAAGGAGCC CCAGGCGGTG
GAGCGCGCGA TGCTGCGCGA GGATCAGGTG CTGTTCACCT ATCTGCATCT GGCCCCGGAC
CCGGCGCAGA CGCGCGAGTT GCTGGCCTCG GGTGTGACCG CGATCGCCTA TGAGACCGTG
ACGGCGCCCG ATGGCACGCT GCCGCTGCTG GCGCCGATGT CCGAAGTGGC CGGGCGGCTG
GCACCGCAGA TGGGCGCCTG GACCCTGCAG AAGGCCAATG GCGGGCGCGG TGTGCTGCTG
GGCGGTGTGC CCGGGGTCGG CGCGGCGGAG GTTGTGGTGA TCGGCGGCGG CGTGGTCGGC
ACCCATGCGG CCCGGGTCGC CGCGGGCATG GGCGCGAAGG TCACGGTCCT GGACCGCTCG
CTGTCGCGGC TGCGATATCT CGACGACGTG TTCGGAGGGC GGTTCGCGAA CCGCTATGCC
TCGCGCGCCG CGACGGCGGA GTTGGTGGCG CAGGCGGACA TGGTGATCGG CGCGGTGCTG
ATCCCCGGGG CTGCGGCGCC CAAGCTGGTG AGCCGCGCGC AATTGGCGGA CATGAAGCCG
GGTGCCGCGA TCGTGGACGT GGCCATCGAT CAGGGCGGGT GTTTCGAGAC CTCGCGGGCG
ACGACGCACC GGGACCCGAT CTACGAGGTG GACGGCATCC TGCATTACTG CGTGGCGAAT
ATGCCCGGCG CGGTGGCACG GACTTCGACC ATCGCGCTGG GCAATGCGAC CCTGCCCTAC
ATGCTGCAGA TCGCGGATCA GGGCTGGCGC GCGGCTGTAA GGGCGGACCC GCATCTGCGC
GCGGGGCTGA ACGTGCACGC GGGCAAGCTG ACCTACCGGG CGGTGGGCGA GGCGCTGGGT
CTGCCGGTGA CCGAGGCCGA CCTGCTGGCG GCCTGA
 
Protein sequence
MRIGCPTEIK PQEFRVGLTP AAAAEAVAHG HAVLVQAGAG VGSGFEDADY IAAGARIVDT 
AEEVFAKADM VVKVKEPQAV ERAMLREDQV LFTYLHLAPD PAQTRELLAS GVTAIAYETV
TAPDGTLPLL APMSEVAGRL APQMGAWTLQ KANGGRGVLL GGVPGVGAAE VVVIGGGVVG
THAARVAAGM GAKVTVLDRS LSRLRYLDDV FGGRFANRYA SRAATAELVA QADMVIGAVL
IPGAAAPKLV SRAQLADMKP GAAIVDVAID QGGCFETSRA TTHRDPIYEV DGILHYCVAN
MPGAVARTST IALGNATLPY MLQIADQGWR AAVRADPHLR AGLNVHAGKL TYRAVGEALG
LPVTEADLLA A