Gene Dshi_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0239 
SymbolnadX 
ID5712165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp237729 
End bp238490 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content73% 
IMG OID641266135 
Productaspartate dehydrogenase 
Protein accessionYP_001531589 
Protein GI159042795 
COG category[R] General function prediction only 
COG ID[COG1712] Predicted dinucleotide-utilizing enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.593965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGG CCCTGATCGG ACTGGGCGCG ATCAACCGCG CGGTGGCGGC GGGAATGGCC 
GGGCAGGCGG AGATGGTCGC CCTGACCCGC AGCGGGGCCG AGGCGCCCGG GGTGATGGCG
GTATCGGACC TCTCGGCGCT GCGCGTCTTC GCGCCGGACC TGGTGGTGGA GGCCGCGGGG
CACGGGGCGG CGCGCGCGTA CCTGCCCGGC CTACTGGCCG CGGGGATCGA TGTGCTGATG
GCGTCGGTCG GCGTGCTGGC GGATCCGGAG ACCGAGGCCG CCTTCCGCGC CGCGCCTGCC
CATGGCGCGC AGCTGACAAT TCCGGCGGGG GCGATTGGCG GGCTGGACCT GTTGGCGGCC
CTGCCGAAGG ACAGCCTGCG CGCGGTTCGC TACACGGGTG TCAAGCCGCC CGCGGCCTGG
GCGGGCAGCC CGGCGGCGGA CGGGCGGGAC CTGTCGGCCC TGGACGGGCC GGTGACGCTG
TTCGAAGGCA CGGCGCGACA GGCGGCGCTG AGATTTCCCA ACAACGCGAA TGTGGCCGCG
ACGCTGGCAT TGGCCGGGGC GGGGTTCGAC AGGACCGAGG CGCGGTTGGT GGCCGACCCG
GACGCGGCAG GCAATGGTCA TGCCTACGAC GTGATCTCGG ACACGGCGGA GATGACGTTT
TCTGTGCGGG CGCGCCCTTC GGACACGCCC GGCACCTCGG CCACCACGGC AATGAGCCTG
TTGCGGGCGA TCCGGAACCG GGACGCCGCG TGGGTGGTCT GA
 
Protein sequence
MRLALIGLGA INRAVAAGMA GQAEMVALTR SGAEAPGVMA VSDLSALRVF APDLVVEAAG 
HGAARAYLPG LLAAGIDVLM ASVGVLADPE TEAAFRAAPA HGAQLTIPAG AIGGLDLLAA
LPKDSLRAVR YTGVKPPAAW AGSPAADGRD LSALDGPVTL FEGTARQAAL RFPNNANVAA
TLALAGAGFD RTEARLVADP DAAGNGHAYD VISDTAEMTF SVRARPSDTP GTSATTAMSL
LRAIRNRDAA WVV