| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0233 |
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| Symbol | |
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| ID | 5712159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 229629 |
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| End bp | 231512 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266129 |
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| Product | putative citrate transporter |
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| Protein accession | YP_001531583 |
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| Protein GI | 159042789 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGCGC TGACGCTCAC CTATCCGATG ATGGTCGTGC TCGGACTGCT CGGCTTCACC
GTGGCGCTGT TCGTGTCCGA AGTGGTGCGG ATCGATTTCG CGGCGATCCT CGTCATGGTG
CTCCTGGGCC TGCTCAGCCA GCTGCCGGGT CTGCACTCAC TGGCGGATGT CAGTACGCTT
TTCGATGGAC TCGCCTCCAA CGCGGTTGTG TCGATCATCG CCGTGATGAT CATCGGCGCC
GGCCTCGACA AGACCGGGCT GATGAGCAAG GTCGCCGCGC TCATCCTGAA ACGCGGCGGC
AGTTCCGAGG CCCGGGTGGT GCCCATCGTG TCGGGCACGG TGGGCGTGAT CTCGTCCTTC
ATGCAGAATG TCGGCGCAGC TGCGCTGTTC CTGCCCGTGG TCAGCCGGAT CTCCGTGCGC
ACGGGCCTGC CGCTCAGCCG GTTGCTGATG CCCATGGGCT TCTGCGCGAT CCTTGGCGGG
ACGCTGACCA TGGTGGGCTC CTCGCCCCTG ATCCTGCTCA ACGACCTGCT GCTGGCGGCC
AATCCGAGCT TGCCGCCCGA CGCCCGGATG GCGCCCTACG GCCTGTTTTC GGTCACCCCG
GTCGGGATCG CGCTTGTCGC TACGGGCATC CTCTATTTCA TGCTCTTCGG CCGCTGGGTC
CTGCCCAGTG GCCAGAAGGG CGGCGACGCC ACCTCCGGCC AGTCCACCAA GGACTACCTC
AAGCAGATCT ACGGGCTGAA AACCGACATC TTCGAGATCA CCATCCCCGA AGGCCACAGG
GTCGCGGGCC AGACCTATGA CGACCTGACC AAGCGGTATC ATGTCTACAT CATCGGGAGC
GCCTATCAGG GCAAGACCTG GTTTGCGCCC GTCATCCAGA CCGAGATCAC ACCGCCCTGC
CGCCTTGCCG TGCTGGGTCG CGCGCGTGAA GTGCGCCACA TGGCCGAGGA CATGGGCTTC
ACCCTCCATG ACCGGCTCGA CGTCTTTGCC GAGGACTACG CCCCCACTAA GTCCGGGATC
GCCGAGGTGG TGATCCCGCC GGGCTCGTCC CTGATCGGGA AATGCGCCCA TGACGTCGTG
TTCCGCAAGA CCTATGGCGC GAGCATGCTG GCCATCCACC GGGGCGAGGA AACCCTGAGC
ATCGTCGAGA CCGAGGATCA CACTCATACC CAGATCGGCG AAGTACCCTT CCGCGCGGGC
GACACGCTCG TGATCCTCAC CACCTGGGAG GCCTTGACCC GGCTCAGTCG AAACAGGGAT
TTCGTGGTCG TGACCTCGGA CTACCCGCAG GAAGAGCCGC GCCCCAAGAA GGTCGGCTGG
GCGCTCTTGT TCTTCGCCAT CGCGCTTGGG CTGATCCTGC TGACGGACCT GCGCCTGTCG
CTCTGCCTGC TGACCGGGGC GGCGGGCATG ATCCTGACCC GCGTGCTCGA CATCGACGAG
GCCTACAATG CCGTGAGCTG GTCGACCGTG TTCCTGCTCG CCAGCCTCAT TCCCCTCGGC
CAGGCGGTGC AATCCTCCGG CACCGCCGCC TGGATCGCGC AGCAGATCCT CATCCTGCTC
GACGGCTGGC CGCTCTGGGC CTTGCAGGCG GGGCTCGCGG TGCTGTCCAC GGTGTTCACG
CTGATCATGT CCAACGTGGG CGCAACCGTG CTGCTGGTGC CGCTGGCGAT CTCCATCGCC
ATGGCCGCGG GCGGCGATCC GGCGCTCTTT GCGCTGACCG TGGCGATCTC GACCTCGAAT
TCCTTCCTGA TCCCCACCCA CCAGGTCAAC GCGCTGATCA TGGGCCCGGC GGGCTACAAG
GTCACCGATT TCATCAAGAG CGGCGGAATC ATGACGCTCC TTTTCCTCGT GGTCTCACTG
AGCGTCATGA ACCTCGTCTT CTGA
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| Protein sequence | MEALTLTYPM MVVLGLLGFT VALFVSEVVR IDFAAILVMV LLGLLSQLPG LHSLADVSTL
FDGLASNAVV SIIAVMIIGA GLDKTGLMSK VAALILKRGG SSEARVVPIV SGTVGVISSF
MQNVGAAALF LPVVSRISVR TGLPLSRLLM PMGFCAILGG TLTMVGSSPL ILLNDLLLAA
NPSLPPDARM APYGLFSVTP VGIALVATGI LYFMLFGRWV LPSGQKGGDA TSGQSTKDYL
KQIYGLKTDI FEITIPEGHR VAGQTYDDLT KRYHVYIIGS AYQGKTWFAP VIQTEITPPC
RLAVLGRARE VRHMAEDMGF TLHDRLDVFA EDYAPTKSGI AEVVIPPGSS LIGKCAHDVV
FRKTYGASML AIHRGEETLS IVETEDHTHT QIGEVPFRAG DTLVILTTWE ALTRLSRNRD
FVVVTSDYPQ EEPRPKKVGW ALLFFAIALG LILLTDLRLS LCLLTGAAGM ILTRVLDIDE
AYNAVSWSTV FLLASLIPLG QAVQSSGTAA WIAQQILILL DGWPLWALQA GLAVLSTVFT
LIMSNVGATV LLVPLAISIA MAAGGDPALF ALTVAISTSN SFLIPTHQVN ALIMGPAGYK
VTDFIKSGGI MTLLFLVVSL SVMNLVF
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