| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0231 |
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| Symbol | rplT |
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| ID | 5712157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 227780 |
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| End bp | 228145 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641266127 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001531581 |
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| Protein GI | 159042787 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGCA CCAAAGGTGG AACCGTCACC CACGCCCGTC ACAAGAAGGT CACCGATGCC
GCCAAAGGCT ATTACGGTCG CCGCAAGAAT ACCTTCAAGG TCGCCCGTCA GGCGGTCGAC
AAGGCCAACC AGTACGCCAC GCGCGACCGC AAGAACCGCA AGCGCCAGTT CCGCGCCCTG
TGGATCCAGC GGATCAATGC CGCCGTGCGC GCCCATGACG AGGCGCTGAC ATACTCGCGT
TTCATCAATG GCCTGTCGCT GGCCGGGATC GAAGTGGACC GCAAGGTTCT GGCCGATCTG
GCCGTGCACG AGCCCGAGGC GTTCAGCGCC ATCGTGGACC AGGCCAAGGC CGCCCTGCCG
GCCTGA
|
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| Protein sequence | MSRTKGGTVT HARHKKVTDA AKGYYGRRKN TFKVARQAVD KANQYATRDR KNRKRQFRAL
WIQRINAAVR AHDEALTYSR FINGLSLAGI EVDRKVLADL AVHEPEAFSA IVDQAKAALP
A
|
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