| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0227 |
|---|
| Symbol | |
|---|
| ID | 5712153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 224639 |
|---|
| End bp | 225388 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641266123 |
|---|
| Product | N-formylglutamate amidohydrolase |
|---|
| Protein accession | YP_001531577 |
|---|
| Protein GI | 159042783 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3931] Predicted N-formylglutamate amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCT GCCCCTTTCT CGAAATCGAC GGCCCTGCGC CCTCCGACTG GGTGCTGCTT
TGCGACCATG CGCGCAACTG GGTCCCGCCC GATGTGGCGG GGGGCGACCT GGGCCTGCCA
CCGGAGGACA TGGCGCGCCA TATTGCTTAC GACCCTGGTG CGGAGGGGGT GACGCGCGTG
CTGGCGGCGG AATTGAATGC CCCGGCGGTG ATGGCGACGT TCTCGCGACT GGTGATCGAC
CCGAACCGGG CCGAGGACGA CCCCACCCTT CTGATGCGGC TCTATGACGG CTCGATCATT
CCGGGCAACC GTCACGCGGA CGCAACCGAA CGGCAACGCC GGATCGAGGC CTGGCACCGG
CCTTACCACG ACGCGGTCAC GGCCATGCTC GCCGCGCGGC CCGAGGCGAT GCTGGTCTCG
ATCCATTCCT TCACCCGGCA ATTGCGCGGC CGGGCGCCGC GGCCCTGGCA TATCGGCGTG
CTCTATTCGG ACGATACGCG GCTGGCGCGC CCGCTGCTCG ACGTTCTGAA CGGCGAGCCG
GATCTGTGCA TCGGGGACAA CCTGCCCTAT TCGGGGCACC TGCCCGGCGA CACGATGGAC
CGCCACGGGG TGCAGCCCGG CCGACCCCAT GTCTTGATCG AATTGCGCAA CGACCTCATT
TCCACACCAG AGACCCAGGC TGCCTGGGGG GTCCGCCTCG CGCACCTCCT GCGGGCGGCG
CACCAACAGA TGGAGGAGAC CCGCTTATGA
|
|---|
| Protein sequence | MDACPFLEID GPAPSDWVLL CDHARNWVPP DVAGGDLGLP PEDMARHIAY DPGAEGVTRV
LAAELNAPAV MATFSRLVID PNRAEDDPTL LMRLYDGSII PGNRHADATE RQRRIEAWHR
PYHDAVTAML AARPEAMLVS IHSFTRQLRG RAPRPWHIGV LYSDDTRLAR PLLDVLNGEP
DLCIGDNLPY SGHLPGDTMD RHGVQPGRPH VLIELRNDLI STPETQAAWG VRLAHLLRAA
HQQMEETRL
|
|---|
| |