| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0196 |
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| Symbol | pdxJ |
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| ID | 5712121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 196281 |
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| End bp | 197045 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266091 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001531546 |
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| Protein GI | 159042752 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA AGACGACTGC GGCACCCGGG GAATTGCGCC TCGGGGTGAA TATCGATCAC
GTGGCCACGG TGCGGAATGC CCGCGGCGGG GCCGTCCCCG ACCCGGTGCG CGCCGCCGTT
CTGGCCCAGC AGGCGGGGGC CGACGGGATC ACCGCCCATC TGCGCGAGGA CCGCCGCCAT
ATCGGAGACG CGGATATCGA GGCGCTGATG GCGGCGCTGA CCGTGCCGCT GAACTTCGAG
ATGGCCGCCA CGGACGAGAT GCAGGCGATC GCGCTGCGCC ACGTCCCGCA TGCGGTCTGC
ATCGTGCCGG AAAAGCGCGA GGAACGCACC ACCGAGGGCG GGCTGGAGGT CGCGCGGGAC
GAGAACCGGC TGGCCCATTT CATCGCGCCT CTGCGCGAGG CGGGCTGCCG GGTGTCGATC
TTCATCGCCG CCGACCGGGC GCAGATCGAA GCCGCGCACC GGATCGGGGC CCCGGTGATC
GAGCTGCACA CGGGCGCCTA TTGCGACGCG GCCGCCGAGG GCGACATCGC CGCGCGGGAT
GCGGAGCTTG CGCGGCTGAC CGAGATGGCG GCCTTCGCCT ACGACCTCGG GCTGGAGGTT
CATGCGGGCC ACGGGCTGAG CTACGACACC GTCGCCCCCA TCGCCGCGCT GCCGCAGGTG
CGGGAGTTGA ATATCGGGCA TTTCCTGATC GGCGAGGCGA TCTTCCGCGG TCTGCCCGAC
GCCATGGCCG AGATGCGCCG CCGGATGGAC GCCGCCCGCG CGTGA
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| Protein sequence | MTDKTTAAPG ELRLGVNIDH VATVRNARGG AVPDPVRAAV LAQQAGADGI TAHLREDRRH
IGDADIEALM AALTVPLNFE MAATDEMQAI ALRHVPHAVC IVPEKREERT TEGGLEVARD
ENRLAHFIAP LREAGCRVSI FIAADRAQIE AAHRIGAPVI ELHTGAYCDA AAEGDIAARD
AELARLTEMA AFAYDLGLEV HAGHGLSYDT VAPIAALPQV RELNIGHFLI GEAIFRGLPD
AMAEMRRRMD AARA
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