Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0194 |
Symbol | relA |
ID | 5712119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 193417 |
End bp | 195561 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641266089 |
Product | GTP pyrophosphokinase |
Protein accession | YP_001531544 |
Protein GI | 159042750 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCGGG ATTCGTCGGA CAGCCTGATC GAAGCCCGCG ACCTGATCGC GCTTGTCCAG ACCTACAACC CCCGGACGAA CGCGGCCCTG ATCGAAGCGG CCTATGACTA CGGTCGCGAG ATGCACCGGG GTCAGTTGCG CCATTCCGGG GAGGAGTATT TCACCCACCC CGTCGCGGTG GCCGCCATTC TTGCCGAGCA GCGGCTGGAT GACAGCACCA TCATTACCGC CCTGCTGCAT GACACCGTCG AAGACACGCG GTCGACCTTT GCCGAGCTGG AATCGCAGTT CGGGCGCGAG ATCGCCGAGC TGGTCAACGG GGTCACCAAC CTGACCAACC TGCAGCTGTC GAGCCGCGAG ACCAAGCAGG CGGAGAATTT CCGCAAGCTC TTCATGGCGA TGTCCAAGGA CCTGCGGGTG ATCCTGGTGA AGCTGGCCGA CCGGCTCCAC AACATGCGCA CGATCAAGCA CATGCCGGTG GAAAAACAGG TCAAGAAGGC CCGCGAGACC ATGGACATCT ATGCGCCGCT GGCCGGGCGG ATGGGCATGC AGTGGATGCG CGACGAACTG GAGGACCTGT CGTTCCGGGT GCTGAACCCG GACGGGCGGC AGTCCATCAT GCGCCGGTTC ATCAAGCTGC AGAACGAGAC CGGCGACGTG GTCCAGAAGA TCACCAGCGA CATCCGCAAG GAGCTGGACG CCCACGGGAT CGAGGCCGAT GTCTATGGCC GGGCGAAGAA ACCCTATTCG ATCTGGCGCA AGATGGAGGC CAAGCAGCTC GGCTTCTCGC GATTGTCGGA TATCTACGGG TTCCGGGTCA TCACCCACAG CGAAGATGAC TGCTACGGGG TGCTGGGCGC GATCCATCAG CGTTGGCGCG CGGTGCCGGG GCGGTTCAAG GATTATATCA GTCAGCCGAA ATCGAACGGG TATCGGTCGA TCCACACCAC GGTGTCGGGC CGTGACGGCA AGCGGGTGGA GGTGCAGATC CGCACCCGCC AGATGCACGA GGTGGCCGAG GCCGGCGTGG CCGCGCACTG GTCCTACCGG GACGGGGTGC AGGTGGAAAA CCCCTTCGCC GTCGACCCGG CGGAGTGGAT CGCCAGCCTG AGCGAGCGGT TCGAAAGCTC CGAGGATCAC GGCGAGTTTC TCGAACACGT CAAGCTGGAG ATGTATTCCG ACCAGGTGTT CTGCTTCACC CCCAAGGGAG AGGTGGTCAA GCTGCCCAAG GGCGCGACGC CACTGGATTA TGCCTACGGC ATTCACACCC GGATCGGGGA CAGTTGCGTG GGGGCCAAGG TGGACGGGAT TCGCGTGCCG CTTTGGACCC GGCTGAAGAA TGGCCAGTCG GTCGAGATCA TCACCGCCGA CGGCCAGCGC CCCCAGGCGA CCTGGATCGA TATCGTGGTC ACTGGCCGCG CCAAGCAGGC GATCCGCCGG TCCCTGCGCG AGGAGGACCG GGCCCGTTTC GTCAAGCTGG GCCAGGAGCT CGCCCGGGTG GCGTTCGACC ATGTGGGCAA GCGCGTGACC GACAAGGCGC TGAAGACCGC CGCGCATCAG CTGGGCTATG GCGGGCGGCT GGAGCTGCTC TCGGCCCTGG GCAGCGCGGA TATCTCGGCC CGGGACGTGG TCGAGGTGCT CTATCCCGAG TTGCAGGGGC AGGGCGGCGA CGAGGTCGCG GCGGATCGCG CGGTGGTCGG CCTTCATTCC GACCAGAGCT TCGAGCGTGC GCGCTGCTGC CAGCCGGTGC CCGGGGAGCG GATCGTCGGC ATCGCCTATC GCGGCCACGG GGTGCGCGTG CACGCCATCG ACTGCCCGGC GCTGGAGGAG TTCGAGGACG AGATGCGGCG CTGGATCGAC CTGCAATGGC ATTCAGGACG CCATGCCGCG GTCCACGCGG TTCGGCTGGA TGTCACGATC GGCAACGATC AGGGCGTTCT GGGACGAATC TGCACATTGA TCGGCGAGCA GCGGGCGAAT ATTTCCGACT TGCATTTTGT TGACCGGAAA CCGGACTTTT ACCGCCTACT TCTAGAAGTA GAAGTGCGGG ACCTGGAGCA CTTGCACCGA GTAATGACCG CCGTGCAGGC CGACACCGAT GTGGCGGGCC TGGAACGACA CCGTGACCTG AGCCGCAAGC CCTGA
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Protein sequence | MPRDSSDSLI EARDLIALVQ TYNPRTNAAL IEAAYDYGRE MHRGQLRHSG EEYFTHPVAV AAILAEQRLD DSTIITALLH DTVEDTRSTF AELESQFGRE IAELVNGVTN LTNLQLSSRE TKQAENFRKL FMAMSKDLRV ILVKLADRLH NMRTIKHMPV EKQVKKARET MDIYAPLAGR MGMQWMRDEL EDLSFRVLNP DGRQSIMRRF IKLQNETGDV VQKITSDIRK ELDAHGIEAD VYGRAKKPYS IWRKMEAKQL GFSRLSDIYG FRVITHSEDD CYGVLGAIHQ RWRAVPGRFK DYISQPKSNG YRSIHTTVSG RDGKRVEVQI RTRQMHEVAE AGVAAHWSYR DGVQVENPFA VDPAEWIASL SERFESSEDH GEFLEHVKLE MYSDQVFCFT PKGEVVKLPK GATPLDYAYG IHTRIGDSCV GAKVDGIRVP LWTRLKNGQS VEIITADGQR PQATWIDIVV TGRAKQAIRR SLREEDRARF VKLGQELARV AFDHVGKRVT DKALKTAAHQ LGYGGRLELL SALGSADISA RDVVEVLYPE LQGQGGDEVA ADRAVVGLHS DQSFERARCC QPVPGERIVG IAYRGHGVRV HAIDCPALEE FEDEMRRWID LQWHSGRHAA VHAVRLDVTI GNDQGVLGRI CTLIGEQRAN ISDLHFVDRK PDFYRLLLEV EVRDLEHLHR VMTAVQADTD VAGLERHRDL SRKP
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