| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0189 |
|---|
| Symbol | |
|---|
| ID | 5712114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 190754 |
|---|
| End bp | 191188 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641266084 |
|---|
| Product | putative cytochrome c class I |
|---|
| Protein accession | YP_001531539 |
|---|
| Protein GI | 159042745 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.380806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTGA TTTCAGGGCT GATGGCGGGG CTGTGTCTGG CCATGCCGGT GCGAGCGGAG
GGGTTTCTGC CCTGGCAGGA TGCGGAGATG GTGGCGCTGG GCGCGACGGT CTATGCCGAT
CACTGCGCGG CCTGTCACGG TGCACAGCTG GAGGGGCAGG TGCCGGACTG GCGCAGCCCG
GGGCCCGACG GACGTCTGCC CGCGCCGCCC CATGACGAGA CCGGCCATAC CTGGCACCAT
GCGGACATGC TGCTGTTCCA GATCACGAAA TACGGGACCG AGGCGCTGAT CGGTGGGGAG
TATCGCAGCA ACATGATGGG GTTCGGCGAT CTGTTGAGTG ATGCGGAGAT CGTCGCCGTT
CTGGCCTATA TCAAGAGCAC CTGGCCGCCG CAGGTCATCG CGGCCCACGA CCGGGTCAAT
GCCGCCGCGC AGTAG
|
|---|
| Protein sequence | MRVISGLMAG LCLAMPVRAE GFLPWQDAEM VALGATVYAD HCAACHGAQL EGQVPDWRSP
GPDGRLPAPP HDETGHTWHH ADMLLFQITK YGTEALIGGE YRSNMMGFGD LLSDAEIVAV
LAYIKSTWPP QVIAAHDRVN AAAQ
|
|---|
| |