| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0186 |
|---|
| Symbol | plsC |
|---|
| ID | 5712111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 187691 |
|---|
| End bp | 188344 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641266081 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001531536 |
|---|
| Protein GI | 159042742 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.412616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGC TGACGGGGGT CGCGGCCTGG CTGCTGGGCG GGGGGCTGAT CCTGCTCGCC
CGCCTGCTGA CCGCGCCGCG CGCGATCTGG CAGGGGATCG AACCTGTACC GCGGCAACGG
GTGTATTACG CCAACCACAC CAGCAATGCC GACCTCATCC TGATCTGGTC CGTCCTGCCC
CCGCGGCTGC GCCGCGCCAC CCGCCCCGTG GCCGGCAGCG ACTACTGGCT GAAATCCAGG
CTCCGCGCCT TTGTCGGGCA TGAGGTCGTC CGCGCCGTGA TGGTCGAGCG GCGCCCCGAG
CATCGCGGCG ACGAGGACCC GATCGCGCTG ATCCTCGACG CGCTGGACGA GGGCAGCTCG
CTGATCATCT TCCCCGAGGG CAAGCGCAAC ATGACCGACG CCCCGGCCCT GCCCTTCAAA
TCGGGGATCT ACAACATTTC CAGGGCCCGG CCCGCCGTGG ACCTCGTCCC GGTCTGGATC
GAGAACCTCA ACCGCGTGAT GCCCAAGGGC CATGTCATCC CGGTCCCGCT CCTGTGTACC
GTGTCCTTCG GCGCGCCCAT CCGCGTCGAG GAGGGCGAAG AGATCGGCCC CTTCCTCGCC
CGCGCCGCCG ATGCCATGGT CGCTCTGCGC CCCAATGGGG GCAGCAAGCC ATGA
|
|---|
| Protein sequence | MRLLTGVAAW LLGGGLILLA RLLTAPRAIW QGIEPVPRQR VYYANHTSNA DLILIWSVLP
PRLRRATRPV AGSDYWLKSR LRAFVGHEVV RAVMVERRPE HRGDEDPIAL ILDALDEGSS
LIIFPEGKRN MTDAPALPFK SGIYNISRAR PAVDLVPVWI ENLNRVMPKG HVIPVPLLCT
VSFGAPIRVE EGEEIGPFLA RAADAMVALR PNGGSKP
|
|---|
| |