| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0182 |
|---|
| Symbol | rnhA |
|---|
| ID | 5712107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 185190 |
|---|
| End bp | 185663 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641266077 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_001531532 |
|---|
| Protein GI | 159042738 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0614621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC TTTTCGCCTA CACGGACGGG GCCTGTTCGG GCAACCCGGG GCCCGGCGGC
TGGGGGGCGC TGCTCATCGC CCGCGACGGC GATACGGTCG TCAAGGAGCG CGCGCTCAAG
GGCGGCGAGG CCGAGACCAC CAACAACCGG ATGGAGCTTC TGGCCGCGAT CCACGCGCTG
GAAGCGCTGG AACGGCCCGC CAGGCTGACC GTCGTGACCG ACAGCGCCTA TGTGAAAGGC
GGGGTCACGG GCTGGATCCA CGGCTGGAAG CGCAATGGCT GGAAAACCTC GACCAAGAAG
CCGGTGAAGA ACGAGGACCT CTGGCGCAGG CTCGATGCCG CCCAGGCCCG GCACGAGGTG
CAGTGGGAAT GGGTCAAGGG CCATGCAGGC CACCCGGAAA ACGAACGCGC GGACGCGCTG
GCCCGGGAAG GCATGGCGCC CTTCAAGCCC GGCAAATCCA AAGCGGGCCG CTGA
|
|---|
| Protein sequence | MPELFAYTDG ACSGNPGPGG WGALLIARDG DTVVKERALK GGEAETTNNR MELLAAIHAL
EALERPARLT VVTDSAYVKG GVTGWIHGWK RNGWKTSTKK PVKNEDLWRR LDAAQARHEV
QWEWVKGHAG HPENERADAL AREGMAPFKP GKSKAGR
|
|---|
| |