| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0178 |
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| Symbol | |
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| ID | 5712103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 181801 |
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| End bp | 182973 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641266073 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_001531528 |
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| Protein GI | 159042734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0609129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTCG ACACCGAGAT CGACCGGCGC AACACTGACT GCATCAAATG GGACAAAATG
GAGAGCGCCT TCGGCGTCTC GCCCGAGGAC GGGCTGGCCA TGTGGATCGC GGACATGGAT
TTCCCGCCAG GCCCGTTTCT GCAGGAGGCC ATGCAGGGCC TGCTCGCCCG CGCCGATTAC
GGCTATTTCT GCGGGCTGGA AAGCTATGAG GACGCGATCA TCGGCTGGAT GCGCGACCGC
CATGGCTGGA CCGTGGAGCG GGAGTGGATG TTCACCACCT ACGGGCTCGG CAACGGCATC
GCCATCACGC TGAACGCCCT GACCGCGCCG GGCGACGAGG TGATCATCTT CTCGCCCGTC
TACCACGAGT TTGCCGCCAA GATCACCAAG ACCGGCCGGG TGGTGAAGGA GTTGCCCCTG
GCGATCGTGG ACGGGGTCTA CACCATGGAT TTCGACGCCT ATGCGGGGAT GCTGTCGGGG
CGCGAGACCA TGGTCATCGC CTGCTCGCCC CACAACCCCG CGGGCCGTGT CTGGACACAA
GAGGAGCTGA CCGCGCTCGC CGATTTCTGC CAGCGTCACG ACTTGCTGCT GATCTCCGAC
GAGATCCACG CGGACCTGAC CTTCGCAGGC CACACCCATA TCCCGATGCA CGTCGCCGCG
CCCCAGATCG CCGACCGGCT GGTGATGACC ACCTCGGCCT CCAAGACCTT CAACATCGCG
GGCGGGCGCA CGGGCTGCGT CACCATTCCC GACCCCGACC TGCGCGCGCG GTTTCACCGG
TTCTTCAACA CGCTCGACAT GCAGCCCAAC CTGCTGGGCG TGGCCCTCAC GCGAGCGGCC
TACTCCCCGG CGGGCGCGGC CTGGTGCGAC GCGCTCTGCA CCTACCTGGA GGGCAACGCC
GCGGTCTTCA ATGACGGCGT GAACGCCATC CCCGGCCTCT CGGCCATGCC GATGCAAGGC
ACCTATCTGG CCTGGGTGGA TTTCGCGGGC ACCGGCATGG AACGGCCGGA ATTTTCCGAG
CGTGTCTATG GCACAGCCCG CATCGCGGCC ACGCCCGGCC ATACACTGGG CAAGGGCGGC
GAGAGCTGCC TGCGGTTCAA TGTCGGCATG CCGCGCGCAC GGGTTCAGGA AGCCGTGGAC
CGGCTGGCCG ACGCTTTCGC GGACCTGCAG TGA
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| Protein sequence | MTFDTEIDRR NTDCIKWDKM ESAFGVSPED GLAMWIADMD FPPGPFLQEA MQGLLARADY
GYFCGLESYE DAIIGWMRDR HGWTVEREWM FTTYGLGNGI AITLNALTAP GDEVIIFSPV
YHEFAAKITK TGRVVKELPL AIVDGVYTMD FDAYAGMLSG RETMVIACSP HNPAGRVWTQ
EELTALADFC QRHDLLLISD EIHADLTFAG HTHIPMHVAA PQIADRLVMT TSASKTFNIA
GGRTGCVTIP DPDLRARFHR FFNTLDMQPN LLGVALTRAA YSPAGAAWCD ALCTYLEGNA
AVFNDGVNAI PGLSAMPMQG TYLAWVDFAG TGMERPEFSE RVYGTARIAA TPGHTLGKGG
ESCLRFNVGM PRARVQEAVD RLADAFADLQ
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