| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0173 |
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| Symbol | cobL |
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| ID | 5711641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 176787 |
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| End bp | 177989 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641266068 |
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| Product | decarboxylating precorrin-6Y C(5,15)-methyltransferase |
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| Protein accession | YP_001531523 |
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| Protein GI | 159042729 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 |
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| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0402881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CGTGGTTGCA TATCGTCGGC ATCGGTGAGG ACGGAATGGC CGGGCTTCTG
CCGGCCACCC GGGCTGTGGT CGAGGCCGCC GAGGTCATCG TCGGCGGGGA GCGGCACCAC
CAGCTCTCCG CCAGCGTCAC GGCCGAGCGG ATCGCCTGGC CGCACCCGTT CGACGCGCTG
ATCGACACCC TGACCGGGCT CGCCGGGCGG CGGGTCGTCG TGCTGGCCAC GGGCGATCCC
CTTTGGTTTT CCGTCGGCGC GCGGATCGGG CGGGCGATCC CGCCGGGCGA GATCACCTAT
CATCCGCAGC TTTCGGCTTT CCAGCTGGCC GCGGCGCGCA TGGGCTGGAG CCTGGCGGAT
GTGGAAACCC TCACCGTCCA TGGCCGCCCC GTCGAGCAGA TGATCGCCTT CATCCAGCCC
GACCAGCGGC TCCTGATCCT GACCACCGGG GCCGAGACCC CGGCGCAGAT CGCGCAGTTT
TTGACCGAGC GCGGCTTCGG GCAGTCGCGC ATGACCGTGC TCGCCGCCAT GGGGGGGGGC
GACGAGGCCC GGTTCGACGG TGTGGCCGAG ACCTGGGACC ACGTTGTGCC GCCGTTCAAC
ACGCTGGCGG TCGAGTGCAT CGCCGCCCCG GATTGCGCGC TGCTGCCCCG GGTGCCGGGG
CTGGCGGATG ACCTTTTCAC CCATGACGGC ACCATGACCA AGCGCGAGGT CCGCGCGGTC
ACGCTGGCCA AGCTGATGCC CATGCGCGGG GCGCTGTTGT GGGATGTGGG CACCGGCTGC
GGCTCGGTCG CGGTGGAATG GATGCGCGGC GCGCGGTATG CCCGCGCCAT CGGGATCGAG
CCGCGCGCGG ACCGCCGTGC CATGGCGGCG GCCAATGCGC TGGCCCTTGG CGTGCCGAAA
CTGCAGGTGA TCGAGGGTAC GGCGCCGGGC GCCTTTGCGG GTCTGGAAGC GCCCGATGCG
ATCTTTCTCG GCGGGGGCCT GAGCGCCGAG GTGTTCGATG CGGCCTGGGC CGCCCTCCGC
CCGCTGGGGC GGCTGGTGGC CAATGCCGTG ACCATCGAGA GCGAGCAGGT GCTGGTGGCG
CTTCACAAGA CCCATGGCGG GGAGCTGTCC AAGCTGTCGG TGCAGCGCGC GGATGCGGTG
GGCCCGCGCC TCGGCTGGCG GCCCTTCATG CCGGTGACCC AGTGGAGCCT GATCAAGCGA
TGA
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| Protein sequence | MTAPWLHIVG IGEDGMAGLL PATRAVVEAA EVIVGGERHH QLSASVTAER IAWPHPFDAL
IDTLTGLAGR RVVVLATGDP LWFSVGARIG RAIPPGEITY HPQLSAFQLA AARMGWSLAD
VETLTVHGRP VEQMIAFIQP DQRLLILTTG AETPAQIAQF LTERGFGQSR MTVLAAMGGG
DEARFDGVAE TWDHVVPPFN TLAVECIAAP DCALLPRVPG LADDLFTHDG TMTKREVRAV
TLAKLMPMRG ALLWDVGTGC GSVAVEWMRG ARYARAIGIE PRADRRAMAA ANALALGVPK
LQVIEGTAPG AFAGLEAPDA IFLGGGLSAE VFDAAWAALR PLGRLVANAV TIESEQVLVA
LHKTHGGELS KLSVQRADAV GPRLGWRPFM PVTQWSLIKR
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