| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0166 |
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| Symbol | cobC |
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| ID | 5711634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 170273 |
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| End bp | 171229 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641266061 |
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| Product | threonine-phosphate decarboxylase |
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| Protein accession | YP_001531516 |
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| Protein GI | 159042722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.271872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA GCGCGCCCCG CGACCATGGC GGCGGGTTGG ATGCGGCAGC GGCCCGGTGG
GGCGGGACGC GGGACGCCTG GCTCGACCTG TCCACCGGGA TCAATCCGGT CAGCTACCCG
ATCCCGGACA TTCCCGGCCC GGACTGGACC GCCCTGCCGG ACGAAAGCGC GTTTTCAGAC
CTGGTGGCCG CGGCGCGCGA CTTCTGGGCG GTCCCGGACG GGCTCGATAT CCTGCCCGCA
CCCGGCGCCT CGGCCCTGAT CGCGGCCCTT CCGGGGCTCG TCCCCGCCAG CCGGGTAGAG
ATCCCGGGCC CCACCTATAA CGAGCATGCC GCCGCCTTCG CCGCCCATGG CTGGGCCCAA
GGTACCGGCC CCGGGGCGGC CTTCGTCGCC GTGCATCCCA ACAACCCCAA CGGCAGGCTC
TGGCAGGCCG AAGAGATCCC CACCGACCGC GCCCTGACCG TGCTCGACGA GAGCTTCTGC
GATATTGCGC CGGAGGCGTC CCTGATGCCA CTGGCCGCGC GCCCCCGCAC GGTGATCCTG
AAAAGCTTCG GCAAGTTCTG GGGCCTTGCG GGTCTGCGGC TTGGCTTTGC CATCGGACAG
GCCGAAACCC TGGCCCCCCT GCGCGACCGG ATCGGGCCCT GGGCGGTATC CGGGCCTGCC
CTGCGCGTCG GCGCGCTGGC CCTGCGTGAC GCCGGCTGGG CCGCCAAGAC ACGGGCCCGG
CTGGACCGCG ACGCGGCCCG GCTGGACGCG CTGGCCAAGG GCTTCGGCTG GTCGGTGACG
GGGGGCACTG GCCTCTTTCG GCTCTACGAC ACCCCCGACG CGAGCGCGGC CCAGGACCGC
CTCGCGCGTC GCCAGATCTG GACCCGGCGG TTCCCCTATT CCGACCGCTG GCTGCGCCTC
GGCCTGCCCG GGACGGAGGC AGACTGGGGG CGTGTCGCGC GCGCGCTGAC CCCATGA
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| Protein sequence | MTASAPRDHG GGLDAAAARW GGTRDAWLDL STGINPVSYP IPDIPGPDWT ALPDESAFSD
LVAAARDFWA VPDGLDILPA PGASALIAAL PGLVPASRVE IPGPTYNEHA AAFAAHGWAQ
GTGPGAAFVA VHPNNPNGRL WQAEEIPTDR ALTVLDESFC DIAPEASLMP LAARPRTVIL
KSFGKFWGLA GLRLGFAIGQ AETLAPLRDR IGPWAVSGPA LRVGALALRD AGWAAKTRAR
LDRDAARLDA LAKGFGWSVT GGTGLFRLYD TPDASAAQDR LARRQIWTRR FPYSDRWLRL
GLPGTEADWG RVARALTP
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