| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0161 |
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| Symbol | cbtA |
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| ID | 5711629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 163128 |
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| End bp | 163817 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641266056 |
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| Product | possible cobalt transporter, subunit CbtA |
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| Protein accession | YP_001531511 |
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| Protein GI | 159042717 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5446] Predicted integral membrane protein |
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| TIGRFAM ID | [TIGR02458] cobalt transporter subunit CbtA (proposed) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.528614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATGA AATTGCTGAC CAGCGCTGTG TTCGCTGGGC TTGCAGCGGG GTTGATTGCC
GCCCTCCTGC AATTTTCGTT CGTGACCTCG TCTCTTCTGG AGGGCGAGCT CTACGAGGCC
GGGGAGAAGG TCCATTTCGC CGTGGACGGC ACGCCACAGT CGCCGCGCGG CGGGGCCGAG
GTCGACCTGG CGGCCGAGCC GGTGCGCTAC GGCCTGACCG TGGCGTTCAA CATCGTGACC
TACACCGGCT TCGGGCTGCT GCTGGTGGCG CTGATGGCGT TGGCCGAAAC GAAGAAGCTG
ACCAAGATCA CCCCGCGCCA GGGCCTGATC TGGGGTCTTG CGGGCTTCGT CGCGATCCAG
CTTGCCCCGG CCATGGGTCA ACCCCCGGTC CTGCCCGGCT CCGTCGGCGC CGAGATCGGG
CCGCGCCAGG CCTGGTGGCT GGCGACCCTG CTCAGCGCGG GTCTGGCGAT GTGGCTTCTG
GCCTTCGGGC GCGGTCTCTG GCCCTGGCTG GCGATCCCGC TCCTGCTTGT GCCGCAGATC
ATCGGCGCTC CGGTGCTCGA CACCTATTTC GGCGTCACCC CGGCCGAACT TGCGGCAAGC
TTTGCGGCCA TGTCGCTGGG CTATTCCGCC GCCGGCTGGG CCGCCCTCGG CTTCTTCGCC
GCCTATTTCT ACTCCCGACA GGAGGCTTGA
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| Protein sequence | MSMKLLTSAV FAGLAAGLIA ALLQFSFVTS SLLEGELYEA GEKVHFAVDG TPQSPRGGAE
VDLAAEPVRY GLTVAFNIVT YTGFGLLLVA LMALAETKKL TKITPRQGLI WGLAGFVAIQ
LAPAMGQPPV LPGSVGAEIG PRQAWWLATL LSAGLAMWLL AFGRGLWPWL AIPLLLVPQI
IGAPVLDTYF GVTPAELAAS FAAMSLGYSA AGWAALGFFA AYFYSRQEA
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