| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0156 |
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| Symbol | lrgB |
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| ID | 5711624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 155880 |
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| End bp | 156596 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266051 |
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| Product | LrgB family protein |
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| Protein accession | YP_001531506 |
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| Protein GI | 159042712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGC TGAGCGCGAT CTGGGTCTAC CTGTCCTCCG AGCCGCTCTT GTGGCTGACC
GCCACGCTCG CGGCCTATGT CGCCGGGGAC GCCCTGTCGA AGCTGTCGGG CCGCGCGCCG
CTGGTCAATC CGGTGCTCGT GGCGGTGGCG CTTCTGGCGC TGGTGCTCTG GGCCAGCGGG
ACCGCCTATG ACACGTATTT CGAGGGTGCC CAGTTCGTCC ATTTCATGCT CGGCCCCGCC
ACGGTCGCGC TGGCCGCGCC CCTCCACGCC AATCTCGCCA AGGTGCGCCG TGCCGCCCTG
CCGATGATCG CGGCCCTCTT TGCCGGCTCG CTCGCGGCCA TGGCGACGGC GGTCGGGGTC
GGCTACGCGC TGGGGCTGCG GGGCGAGGTG CTGATGTCGC TGGCCCCGAA ATCGGCCACC
GCGCCCGTGG CGCTGGGCAT CGCCGAGAAC ATCGGTGGCC TGCCCACGCT CACCGCCGTG
CTGGTGATCC TGACTGGCAT CATCGGCGCG GTGGCGGCCA CACCTCTCTT GAACCTGCTG
CGTATCCGCG ATTGGCGGGC GCGCGGCTTT GCGGTCGGGG TCGCGGCCCA CGGCATCGGT
ACCGCCCGGG CGTTTCAGGT CAACGAGACC GCCGGGGCTT TCGCCGGGAT CGGCATGGGC
GTAAACGCAG TACTGACCGC TGTTCTGGCC CCGCTGCTGC TGGGGCTGAT ATTCTGA
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| Protein sequence | MTELSAIWVY LSSEPLLWLT ATLAAYVAGD ALSKLSGRAP LVNPVLVAVA LLALVLWASG
TAYDTYFEGA QFVHFMLGPA TVALAAPLHA NLAKVRRAAL PMIAALFAGS LAAMATAVGV
GYALGLRGEV LMSLAPKSAT APVALGIAEN IGGLPTLTAV LVILTGIIGA VAATPLLNLL
RIRDWRARGF AVGVAAHGIG TARAFQVNET AGAFAGIGMG VNAVLTAVLA PLLLGLIF
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