| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0154 |
|---|
| Symbol | |
|---|
| ID | 5711622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 154275 |
|---|
| End bp | 154820 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641266049 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001531504 |
|---|
| Protein GI | 159042710 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC CCAGACTTCT CGGCCTGTCC GGCTCCCTCC GGGCGGGCAG TTTCAACACG
CAACTGATGC GTGAGGCGGC AGCGCGCTTC GGTCCCGCGG AGTTCAGTGA AGGCAATCTG
CGCCTGCCGC TCTATGATGG CGATCTGGAG AGCGCCGAGG GCATCCCGGC CGAGGTGCAG
ATGCTGGCAG ACCAGATCGC CGCGGCGGAT GCGGTGATCA TCGCGTCGCC GGAATACAAC
CAGAGCCTGA CCGGGGTGTT GAAGAACGCG CTCGACTGGG TGAGCCGGTT GGAGGGCAAG
CCCTGGGCCG GCAAGCCGGT GGCGATCGTC GCGGCGGCGG CGGGGCGCGC GGGCGGGGCG
CGCGGGACCT ATGCCCTGCG GCTGGCGATG ATGCCCTTCG GCGCCCATGT GCTGCCGGGG
CCGGAGGTTC TGGTGGCAGG CGCGTTCAGG GAGTTCGACA GCGAGGGCAA GCTGATCACG
GAAAGCTACC AGAAGATACT CGACGCCCTG ATGGCGGAGC TGCGCAAGGC GGCGATGGCG
GGCTGA
|
|---|
| Protein sequence | MTQPRLLGLS GSLRAGSFNT QLMREAAARF GPAEFSEGNL RLPLYDGDLE SAEGIPAEVQ
MLADQIAAAD AVIIASPEYN QSLTGVLKNA LDWVSRLEGK PWAGKPVAIV AAAAGRAGGA
RGTYALRLAM MPFGAHVLPG PEVLVAGAFR EFDSEGKLIT ESYQKILDAL MAELRKAAMA
G
|
|---|
| |