| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0147 |
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| Symbol | smpB |
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| ID | 5711615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 147392 |
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| End bp | 147874 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266042 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001531497 |
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| Protein GI | 159042703 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.972615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CCAAGACCCC CGAGGAAAAG AACTACAAGG TGATCGCCGA GAACCGGCGG
GCGCGGCGCG AGTATGCGAT CGAGGAAGAC CTCGAAGTGG GCATCGTGCT GGAAGGGTCG
GAGGTCAAAT CCCTGCGCGA GGGCGGCTCG AACATCGCCG AGAGTTATGC CACGGTGGAT
GATGGGGAGT TGTGGTTGGT CAACAGCTAC ATCGCGCCCT ACGCCCAGGC CAAGACCTGG
AAGCACGAGG AGCGGCGGCG GCGCAAGCTG CTGGTCTCGC GTCGGGAGCT GTCGCGGTTG
TGGAACGCGA CCCAGCGGCA AGGCATGACG CTGGTGCCCT TGGTGATGTA TTTCAACCAT
CGCGGGCTGG TGAAGCTGAA GATCGGTGTG GCCAAGGGCA AGAAGCTGGC GGACAAGCGG
CAGACTGATG CCAAGCGGGA CTGGAACCGT CAGAAACAAC GCCTGCTGAA GCAGAACCTT
TAG
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| Protein sequence | MAKPKTPEEK NYKVIAENRR ARREYAIEED LEVGIVLEGS EVKSLREGGS NIAESYATVD
DGELWLVNSY IAPYAQAKTW KHEERRRRKL LVSRRELSRL WNATQRQGMT LVPLVMYFNH
RGLVKLKIGV AKGKKLADKR QTDAKRDWNR QKQRLLKQNL
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