| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0144 |
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| Symbol | amtB |
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| ID | 5711612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 143570 |
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| End bp | 144883 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641266039 |
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| Product | ammonium transporter |
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| Protein accession | YP_001531494 |
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| Protein GI | 159042700 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA CGAAACTCCT TCCGCTGGCT GCGGCGGCAA TTGTCCTGCC GAGCCTTGGA
CTTGCCCAGG ACGCCGCGCC CTCGTTCGAC GAAATCGGCC CCTACATCAT GACCACCCTG
TTGTTCTGCA TGGCGGGCTT CCTGGTGTTC TTCATGGCCT GCGGGTTCGC GATGCTCGAG
GGCGGCCTGG TGCGGTCCAA GAACGTCACC ATGCAGATGA CCAAGAACAT CGCGCTCTAT
TCGATTGCCG CGGTCATGTA CTGGCTCATC GGCTTCAACC TGATGTATCC GGGCGACTTC
AACGGCTATG TGGGCAGCTT CTTCGTCCCG ACCGTTCTGG ACCCCGTAGG CGTGGCCGCG
GCTGATGCGG CACTGGACTA TGCCTCCATC GGTTCGGACT TCTTCTTCCA ACTGGTTTTC
GTCGCTGCAA CCGCGTCCAT CGTGTCCGGT GCCCTCGCCG AGCGGATCAA GCTCTGGCCC
TTCCTCGCCT TCGTGGTGGT CCTGACCGGC ATCATGTACC CGATCTCCGG CTCCTGGCAG
TGGGGCGGCG GCTGGCTGTC CGAGATGGGC TTTTCGGACT TCGCGGGCTC GACCGTCGTG
CACTCCGTGG GCGGCTGGGC TGCTCTGGCC GGTGCAATCA TCCTCGGTCC GCGCCTGGGC
AAGTACAAGG ATGGTCGCGT CAACCCGATG CCCGGCTCCA ACCTTGCCCT CGCCACGCTT
GGCACGTTCA TCCTGTGGCT CGGCTGGTTC GGCTTCAATG GCGGCTCGCA GCTGGCGATG
GGCACCGTGG GCGATGTCTC TGACGTGTCG CGCATCTTCG CCAACACCAA CATGGCTGCG
GCGGCCGGTG CTCTGACCGC GCTGATTCTG ACCCAAGTCC TCTACAAAAA GCCGGACCTG
ACCATGGTGC TCAACGGCGC TCTGGCGGGC CTCGTGTCCA TCACCGCAAG CCCGCTCGAC
CCGACACTCT TCGGCGCGCT CTGGATCGGG GCTGTCGGGG GCGTGATCGT GGTCTTTACG
GTGCCGCTGC TGGACAAGTT CAAGATCGAC GACGTTGTCG GCGCCATTCC GGTGCACCTC
TTCGCCGGCA TCTGGGGCAC CATTGCCGTG GTGTTCTACC AGGAGGGCGC AAGCCTCGTG
ACACAGCTGG TCGGGATCGC CGCCTACGGT GTCTTCACCT TCGGGGTCGG GCTGATCGTG
TGGTACCTGC TCAAGCTGAC CATGGGCATT CGTGTCAGTG AAGAGGACGA GATCAACGGT
CTCGACACCT CCGAACTGGG CATGGAAGCC TATCCCGACT TCACCAAGGG CTGA
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| Protein sequence | MKLTKLLPLA AAAIVLPSLG LAQDAAPSFD EIGPYIMTTL LFCMAGFLVF FMACGFAMLE
GGLVRSKNVT MQMTKNIALY SIAAVMYWLI GFNLMYPGDF NGYVGSFFVP TVLDPVGVAA
ADAALDYASI GSDFFFQLVF VAATASIVSG ALAERIKLWP FLAFVVVLTG IMYPISGSWQ
WGGGWLSEMG FSDFAGSTVV HSVGGWAALA GAIILGPRLG KYKDGRVNPM PGSNLALATL
GTFILWLGWF GFNGGSQLAM GTVGDVSDVS RIFANTNMAA AAGALTALIL TQVLYKKPDL
TMVLNGALAG LVSITASPLD PTLFGALWIG AVGGVIVVFT VPLLDKFKID DVVGAIPVHL
FAGIWGTIAV VFYQEGASLV TQLVGIAAYG VFTFGVGLIV WYLLKLTMGI RVSEEDEING
LDTSELGMEA YPDFTKG
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