| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0136 |
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| Symbol | ugpQ |
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| ID | 5711604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 134622 |
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| End bp | 135395 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641266031 |
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| Product | cytosolic glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_001531486 |
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| Protein GI | 159042692 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCGC CCCTGCCCCG GGCCTTCGTG ACCCGGCCCC TGGCCCATCG CGGGCTCCAC
GACCCGACAA CCGCGCGGAT CGAGAACAGT CGTGCGGCCA TAGAGGCGGC GATGCAGGCC
GGCTACGGCA TCGAGATCGA CGTGCAATTG ACCGCGGATG GCGCGGCGCT GGTCTTCCAC
GATGCCGAGC TTGACCGGCT GACGGGCGAG ACCGGACCTG TGCGGGCGCG CTCCCTCGCG
GCGCTGCAGG CGATCCGCCT GCGTGGGGCC GCAGATGGGC CACCGGAACT ATCCGAAGTA
ATGGCCCATG TGGGTGGGCG CGTGCCGCTC CTGATCGAGC TGAAGGATCA GTCCGGCAGT
CTTGGCCCCG AGAGCGAGGC GCTGGCCGCG GCGGTCGCGG GCGTGATCGG CGCGGCGACG
GACAACATCG CGGTGATGTC GTTCAACCCA CACACCGTCC AGCATCTCGC GCGGCTCCTG
CCTTCGGTGC CGCGGGGTTT GACGACCATG GACTTCCGCA CGGAAAACAC GCTCAGCCCC
GAACAACAGG TCCGGCTGAA CGCCATCGCG ACCTTCGACG CGGTCGGTGC GAGCTTCATC
AGCCACGATC GTCGCAGCCT CGACATGGAC GCGGTGACCC GGCTGCGGCA CCGCGGTGTG
CCTGTTCTGA CCTGGACCAT CACCAGCCCG GCGGAGGCGC GCGAGGCCCT GCAGGCTGCC
GACAACATCA CCTTCGAGGG GTTCCTGCCC CCGCGGCCCG TGCCGGAGGC TTGA
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| Protein sequence | MTPPLPRAFV TRPLAHRGLH DPTTARIENS RAAIEAAMQA GYGIEIDVQL TADGAALVFH
DAELDRLTGE TGPVRARSLA ALQAIRLRGA ADGPPELSEV MAHVGGRVPL LIELKDQSGS
LGPESEALAA AVAGVIGAAT DNIAVMSFNP HTVQHLARLL PSVPRGLTTM DFRTENTLSP
EQQVRLNAIA TFDAVGASFI SHDRRSLDMD AVTRLRHRGV PVLTWTITSP AEAREALQAA
DNITFEGFLP PRPVPEA
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