Gene Dshi_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0130 
Symbolabi 
ID5711753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp128795 
End bp129697 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID641266025 
Productabortive infection protein 
Protein accessionYP_001531480 
Protein GI159042686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTT CCCGGTCCCT TTGGACCCCA GAGTTCGACC ATTTCACCGA GCCCGCACGC 
CGCCGCGCGG GGCTGGGATG GCTCGTGCTG GGATGTGTCC TGGTGATCGG GATCTATGCC
GCGTCGCTCA TGGGGATCTT CGGTGCCATC GGGCTGATCG GCGGCGAGGG CGCCGCGGCC
CAATGGCTGC TGCGGGTGCA GACCGCTGCC GGACCCACGG CGACGCTCCT GCTGCTGGCG
ACCTTTGGTG GGCTCGTGCT GGGCCTCTGG GCCTGCTTGC GGCTGGTCCA CCGCCGGCCT
CTCGGGAGCG TGATCGGCGC GCGGGAGCAG ACGGCGCGCG ACTTCCGTCG TGCGAGCGTG
ATCACCCTGG CGGGCATGGG CCTTTCGCTG CTGCTCTTCC TGCCGGGCAT GGAGATCCTG
CCAAACCTGC CTTTGGGCAT CTGGGTGTCG TTCCTGCCCC TGGCCCTGCT GATGATCGCG
CTGCAGACCG GCGCGGAAGA GATGCTCTTT CGCGGCTACC TGCAACAGCA ACTCGCGGCG
CGGTTCTCCA GCCCGCTGGT CTGGATGTTG CTGCCCAGTG CTCTCTTCGG CGCGGCTCAT
TACGACCCGA CCACGGCCGG CGACACGGCC TTGCAGGTGG CCTTGGCGGC GGGGATCTTC
GGGCTGATGG CGGCGGATCT GACCCGGCTG ACCGGCAATA TCGGCGCGGC CTGGGGGATG
CATTTCGCCA ATAACTGCAT GGCGATCCTC GGGGTATCGG TGCAGGGCAC GATCCCGGGC
CTGTCGCTCT ACACCACCGA GCTTGCGATT TCGGACACCG CCGAGATCAG CGTGCTGCTG
TGGCAGGACA TGGCGCTGAC GCTTCTCTTC TATCTCGCGA TCCGCTGGGT CGTGACCCGC
TGA
 
Protein sequence
MSLSRSLWTP EFDHFTEPAR RRAGLGWLVL GCVLVIGIYA ASLMGIFGAI GLIGGEGAAA 
QWLLRVQTAA GPTATLLLLA TFGGLVLGLW ACLRLVHRRP LGSVIGAREQ TARDFRRASV
ITLAGMGLSL LLFLPGMEIL PNLPLGIWVS FLPLALLMIA LQTGAEEMLF RGYLQQQLAA
RFSSPLVWML LPSALFGAAH YDPTTAGDTA LQVALAAGIF GLMAADLTRL TGNIGAAWGM
HFANNCMAIL GVSVQGTIPG LSLYTTELAI SDTAEISVLL WQDMALTLLF YLAIRWVVTR