Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0113 |
Symbol | ahpC |
ID | 5711736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 112059 |
End bp | 112541 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641266008 |
Product | redoxin |
Protein accession | YP_001531463 |
Protein GI | 159042669 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTGG GTGACAAACT ACCCGAGGCC GATCTGATCA AGCTGGGCGC TGATGGACCG GAAACCGTGT CGGTGTCGAG CCTGACGGCA GGACGCAAGG TGATCCTGTT CGCGGTGCCG GGGGCCTATA CACCGACCTG CCACTCGGCC CATGTACCGA GCTTCGTGCG CACCAAGGAC GCGTTCGCCG CAAAGGGCGT GGACGAGATC ATCTGTGTGT CGGTCAACGA TCCCTTCGTC ATGAAGGCCT GGGGCGAGGC GACCGGGGCC GCAGATGCGG GCATCACCAT GCTGGGCGAT CCCGGCAGCG AGTTTACCAA GGCGATCGGC ATGGATTTCG ACGCCCCGCC AGCGGGGCTT CATGCCCGCT CCAAGCGCTA TGCGCTCTAT GCCGAGGACG GTGTGGTCAA AGTGCTCCAT GCCGAGGAAA ACCCGGGCGT TTGCGAGACC TCCGGCGGCG AGGCAATGCT CGACGCGATC TGA
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Protein sequence | MQVGDKLPEA DLIKLGADGP ETVSVSSLTA GRKVILFAVP GAYTPTCHSA HVPSFVRTKD AFAAKGVDEI ICVSVNDPFV MKAWGEATGA ADAGITMLGD PGSEFTKAIG MDFDAPPAGL HARSKRYALY AEDGVVKVLH AEENPGVCET SGGEAMLDAI
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