Gene Dshi_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0113 
SymbolahpC 
ID5711736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp112059 
End bp112541 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content64% 
IMG OID641266008 
Productredoxin 
Protein accessionYP_001531463 
Protein GI159042669 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGG GTGACAAACT ACCCGAGGCC GATCTGATCA AGCTGGGCGC TGATGGACCG 
GAAACCGTGT CGGTGTCGAG CCTGACGGCA GGACGCAAGG TGATCCTGTT CGCGGTGCCG
GGGGCCTATA CACCGACCTG CCACTCGGCC CATGTACCGA GCTTCGTGCG CACCAAGGAC
GCGTTCGCCG CAAAGGGCGT GGACGAGATC ATCTGTGTGT CGGTCAACGA TCCCTTCGTC
ATGAAGGCCT GGGGCGAGGC GACCGGGGCC GCAGATGCGG GCATCACCAT GCTGGGCGAT
CCCGGCAGCG AGTTTACCAA GGCGATCGGC ATGGATTTCG ACGCCCCGCC AGCGGGGCTT
CATGCCCGCT CCAAGCGCTA TGCGCTCTAT GCCGAGGACG GTGTGGTCAA AGTGCTCCAT
GCCGAGGAAA ACCCGGGCGT TTGCGAGACC TCCGGCGGCG AGGCAATGCT CGACGCGATC
TGA
 
Protein sequence
MQVGDKLPEA DLIKLGADGP ETVSVSSLTA GRKVILFAVP GAYTPTCHSA HVPSFVRTKD 
AFAAKGVDEI ICVSVNDPFV MKAWGEATGA ADAGITMLGD PGSEFTKAIG MDFDAPPAGL
HARSKRYALY AEDGVVKVLH AEENPGVCET SGGEAMLDAI