Gene Dshi_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0103 
SymboladhI 
ID5711726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp102930 
End bp104042 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content64% 
IMG OID641265998 
Productalcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase 
Protein accessionYP_001531453 
Protein GI159042659 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGA AAGCAGCCGT CGCCATTGCC GCGGGCAAAC CGCTGGAAGT GATGGAGGTG 
AACCTGGAAG GCCCCAAGGC GGGCGAGGTT CTGGTCGAGA TCAAGGCAAC GGGGATTTGT
CACACCGACG AGTTCACCCT GTCGGGCGCG GATCCGGAGG GGCTCTTTCC TGCGATCCTG
GGCCATGAGG GTGCCGGGGT CGTGATGGAG GTCGGGCCGG GCGTGACCAG CCTCAAGCCC
GGGGATCACG TGATCCCGCT CTACACCCCG GAATGCCGGG AGTGCGAATA CTGCCTGAAC
CCCAAGACCA ACCTTTGCCA GTCGATCCGA ACCACGCAAG GGGCGGGGCT GATGCCAGAC
GGCACCTCGC GGTTCTCCAC CCTCGATGGC GACCCGATCC TGCATTACAT GGGCTGTTCG
ACCTTCGCGA ACCACACGGT CCTGCCCGAG ATCGCGCTGG CCAAGGTGCG GCCCGACGCG
CCCTTTGACA AGATCTGCTA TATCGGCTGC GGCGTGACCA CCGGCATCGG TGCAGTGATC
AACACCGCCA AGGTCGAGAT CGGCAGCCGT GCAATCGTCT TCGGGCTGGG GGGTATCGGG
CTGAACGTGA TCCAGGGGCT GCGGCTTGCC GGCGCCGACC AGATCGTCGG CGTGGATCTG
AACCCCGACA AGATCCCCAT GGCGGAGCGG TTCGGCATGA CCGATTTCGT CAACCCGGCG
GAGGTCGAAG GCGATCTCGT ACCCTATCTC GTGGACCTGA CCAAGGGCGG CGCGGACTAT
ACCTTCGACG CCACCGGCAA TGTGCAGGTG ATGCGCGCGG CCCTCGAATC CGCTCATAAG
GGCTGGGGCG AGAGCATCAT CATCGGCGTG GCCCCGGCTG GTGCCGAGAT CGCGACGCGG
CCCTTCCAGC TGGTCACGGG CCGGGTCTGG CGCGGCACTG CTTTTGGCGG CGCGCGGGGT
CGGACGGATG TGCCGAAGAT CGTGGACTGG TACATGGAGG GCAAGATCGA GATTGACCCG
ATGATCACCC ACACCATGCC TCTTTCGGAC ATCAACACCG GCTTCGACCT GATGCATGCG
GGCGAGTCGA TCCGGTCCGT TGTCATCTAT TGA
 
Protein sequence
MRTKAAVAIA AGKPLEVMEV NLEGPKAGEV LVEIKATGIC HTDEFTLSGA DPEGLFPAIL 
GHEGAGVVME VGPGVTSLKP GDHVIPLYTP ECRECEYCLN PKTNLCQSIR TTQGAGLMPD
GTSRFSTLDG DPILHYMGCS TFANHTVLPE IALAKVRPDA PFDKICYIGC GVTTGIGAVI
NTAKVEIGSR AIVFGLGGIG LNVIQGLRLA GADQIVGVDL NPDKIPMAER FGMTDFVNPA
EVEGDLVPYL VDLTKGGADY TFDATGNVQV MRAALESAHK GWGESIIIGV APAGAEIATR
PFQLVTGRVW RGTAFGGARG RTDVPKIVDW YMEGKIEIDP MITHTMPLSD INTGFDLMHA
GESIRSVVIY