| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0088 |
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| Symbol | |
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| ID | 5711711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 86564 |
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| End bp | 87034 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641265983 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001531438 |
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| Protein GI | 159042644 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0114414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.53865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGA CGCTGTGCGT GGTCGGCCGC CTGCGGGCGG GACCGGAACG CGACCTGATC
AATGACTACC TGCAACGCTT CGACCGCACC GGGCGGGGTC TTGGCCTCGG TCCGGCGAGC
GTCGTCGAGG TTGAGGACCG CAAGGGCGGC GGGAAGGCGG CGGAGGCTGA CCTGTTGCGC
AAGGCGGTGC CGCGTGGTGC CGTGATCTGC GCGCTGGACG AGCGCGGCAA GACCATGAGT
TCGCCGCAAT TCGCCGACAG TCTTGCAGGC TGGCGCGATG CGGGGCGCAG CGATCTGGCG
TTCCTGATCG GCGGGGCGGA CGGGCTCGAC AAGGCCTTGC GCGCGCAGGC GGAGGCGCGC
TTGTCCTTCG GGGCGATGGT ATGGCCGCAC ATGCTCGCCC GTGTGATGCT TGCCGAACAG
TTGTATCGCG CGGCCGCGAT CCTGGCAGGG ACGCCGTATC ACCGCGTGTA A
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| Protein sequence | MKVTLCVVGR LRAGPERDLI NDYLQRFDRT GRGLGLGPAS VVEVEDRKGG GKAAEADLLR
KAVPRGAVIC ALDERGKTMS SPQFADSLAG WRDAGRSDLA FLIGGADGLD KALRAQAEAR
LSFGAMVWPH MLARVMLAEQ LYRAAAILAG TPYHRV
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