Gene Dshi_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0086 
Symbol 
ID5711709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp85412 
End bp86014 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content62% 
IMG OID641265981 
ProductSOUL heme-binding protein 
Protein accessionYP_001531436 
Protein GI159042642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0502327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.302554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA CCACACATAT AGCCTTGATG CTCGGTATGA TGGTCGCCGC GGTGTCGGTG 
GGCGCAGAAG CGCAGCTTTA TCGTGGATAT GAGACCCCCA GCTATGAAGT CACCGTGAAA
AAAGGCGATT TCGAGCGTCG CAGCTATGCG CCGCAGGTCG TCGCGGAGGT CTATGTGCAA
GGCGACCGGG AAGAGGCCGT CTCGCGCGGC TTCCGCGTGC TGGCCGACTA CATCTTCGGC
GGCAACGTGG ATGAGGCCAA GGTCGCGATG ACCACACCGG TCAGTCAGCA GGCCGCCGAC
GATGATGACG CCGGTCTCTG GGTCGTGCGA TTCGGGATGC CCCGGGGTTA CACACTGGAA
AACCTGCCGA AGCCGCAATC GGCGGCGATC CGTCTGACCG AGACACCGGC GGAGGACCAA
TTGGTGGTGC AGTTCACCGG CCGCTGGAGC GAAGCACAGC TCACCCAGAA AGAGCTGGAA
TTGCGGGCTT TTGCAGCAGC GCACGGGTTG GACGCGTCCG GTGCGCCGCG GTTCTATTTT
TATGATGGGC CGTTCACCCT GCCGTGGACT CGCCGCAACG AGGTTGCGCT CGTTTTGAAT
TGA
 
Protein sequence
MIRTTHIALM LGMMVAAVSV GAEAQLYRGY ETPSYEVTVK KGDFERRSYA PQVVAEVYVQ 
GDREEAVSRG FRVLADYIFG GNVDEAKVAM TTPVSQQAAD DDDAGLWVVR FGMPRGYTLE
NLPKPQSAAI RLTETPAEDQ LVVQFTGRWS EAQLTQKELE LRAFAAAHGL DASGAPRFYF
YDGPFTLPWT RRNEVALVLN