Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0086 |
Symbol | |
ID | 5711709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 85412 |
End bp | 86014 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641265981 |
Product | SOUL heme-binding protein |
Protein accession | YP_001531436 |
Protein GI | 159042642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0502327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.302554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCA CCACACATAT AGCCTTGATG CTCGGTATGA TGGTCGCCGC GGTGTCGGTG GGCGCAGAAG CGCAGCTTTA TCGTGGATAT GAGACCCCCA GCTATGAAGT CACCGTGAAA AAAGGCGATT TCGAGCGTCG CAGCTATGCG CCGCAGGTCG TCGCGGAGGT CTATGTGCAA GGCGACCGGG AAGAGGCCGT CTCGCGCGGC TTCCGCGTGC TGGCCGACTA CATCTTCGGC GGCAACGTGG ATGAGGCCAA GGTCGCGATG ACCACACCGG TCAGTCAGCA GGCCGCCGAC GATGATGACG CCGGTCTCTG GGTCGTGCGA TTCGGGATGC CCCGGGGTTA CACACTGGAA AACCTGCCGA AGCCGCAATC GGCGGCGATC CGTCTGACCG AGACACCGGC GGAGGACCAA TTGGTGGTGC AGTTCACCGG CCGCTGGAGC GAAGCACAGC TCACCCAGAA AGAGCTGGAA TTGCGGGCTT TTGCAGCAGC GCACGGGTTG GACGCGTCCG GTGCGCCGCG GTTCTATTTT TATGATGGGC CGTTCACCCT GCCGTGGACT CGCCGCAACG AGGTTGCGCT CGTTTTGAAT TGA
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Protein sequence | MIRTTHIALM LGMMVAAVSV GAEAQLYRGY ETPSYEVTVK KGDFERRSYA PQVVAEVYVQ GDREEAVSRG FRVLADYIFG GNVDEAKVAM TTPVSQQAAD DDDAGLWVVR FGMPRGYTLE NLPKPQSAAI RLTETPAEDQ LVVQFTGRWS EAQLTQKELE LRAFAAAHGL DASGAPRFYF YDGPFTLPWT RRNEVALVLN
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