| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0081 |
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| Symbol | imdh |
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| ID | 5711704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 80080 |
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| End bp | 81186 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641265976 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001531431 |
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| Protein GI | 159042637 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0813149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CTTCCCTTCT GATCCTTGCC GGGGACGGCA TCGGCCCCGA GGTCATGGCC
GAGGTGCGCA AGATCATCGA CTGGTACGGC GCCAAGCGCG ACCTGGCGTT CGACGTGTCG
GAAGATCTCG TGGGCGGGGC GGCCTACGAC GTGCACGGTG TGCCGCTTGC GGACGAGACC
ATGGCCAAGG CCCAAGCGGT CGACGCCGTC CTGCTCGGCG CCGTGGGCGG GCCGAAATAC
GACACGCTCG ACTTCTCGCT GAAGCCCGAG CGCGGCCTGC TGCGCCTGCG CAAGGAGATG
GACCTCTTTG CCAACCTGCG CCCGGCCCAG TGCTTCGACG CGCTGGCGGA TTTCTCGTCG
CTCAAGAAGG ATATCGTCGC CGGGCTGGAC ATCATGATCG TGCGCGAGCT GACCTCCGGC
GTCTATTTCG GCGAGCCGCG CGGCATCCAC AAGGAAGGCA ACGAGCGGGT CGGCATCAAT
ACACAGCGCT ATACCGAGAG CGAGATCGCC CGCGTCGCGC GTTCGGCCTT CGAGCTGGCC
AAGAAGCGCG GCAACAAGGT CTGCTCGATG GAGAAAGCCA ATGTCATGGA GTCGGGCATC
CTGTGGCGCG ACGTGGTGAC CGAGATCCAT GCCGCCGAAT ACGCGGATGT GGAGCTGAGC
CACATGTATG CCGATGCAGG CGCCATGCAG CTCGTGCGCG CGCCCAAGCA GTTCGACGTC
ATCGTCACCG ACAACCTGTT CGGCGACCTG CTGTCCGATG CGGCGGCGAT GCTCACCGGC
TCGCTCGGCA TGCTGCCCTC GGCCTCCCTC GGGCTGCCGA TGGAAAACGG ACGGCCCAAG
GCGCTCTACG AGCCGGTCCA CGGCTCCGCC CCGGACATCG CAGGCCAGGG CAAGGCCAAC
CCCTGCGCCT GCATCCTGAG CTTTGCTATG GCGCTGCGCT ACTCCTTTGA CCAGGGGGCA
GAGGCCGACC GGCTGGAAGC CGCGGTCAAC CAAGTGCTCG CCCAGGGCAT CCGCACCGCG
GACCTGATGC AGGCAGGCGA CACCGCGCCG GCCAGCACAT CGCAAATGGG CGATGCGGTG
ATCGCGGCCC TCGACGCCAG CCTCTGA
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| Protein sequence | MSTASLLILA GDGIGPEVMA EVRKIIDWYG AKRDLAFDVS EDLVGGAAYD VHGVPLADET
MAKAQAVDAV LLGAVGGPKY DTLDFSLKPE RGLLRLRKEM DLFANLRPAQ CFDALADFSS
LKKDIVAGLD IMIVRELTSG VYFGEPRGIH KEGNERVGIN TQRYTESEIA RVARSAFELA
KKRGNKVCSM EKANVMESGI LWRDVVTEIH AAEYADVELS HMYADAGAMQ LVRAPKQFDV
IVTDNLFGDL LSDAAAMLTG SLGMLPSASL GLPMENGRPK ALYEPVHGSA PDIAGQGKAN
PCACILSFAM ALRYSFDQGA EADRLEAAVN QVLAQGIRTA DLMQAGDTAP ASTSQMGDAV
IAALDASL
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