| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0080 |
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| Symbol | |
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| ID | 5711703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 78969 |
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| End bp | 79955 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641265975 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_001531430 |
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| Protein GI | 159042636 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.109193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT CATCCAACCT CAAGGGAGCC CTGCTGGGCC TTGCGGCCTT CGCCGTCTTC
GCGGTCCATG ACGTGGTCGT GAAAACGCTC GGGGGCAGTT ACACACCGTT CCAGATCGTG
TTCTTCGGCG TGCTGTTCAG CTTCCCGCTG ACCACCGTGA TGATGATGCG CGAGAAAGCT
CATGGCAATC TGCGGCCCCG GCATCCTTGG TGGATCGCCC TGCGCACCGG CGCGGCGGTG
ATCACCGGCC TGACCGCGTT CTACGCCTTC ACGGTCCTGC CGCTGGCACA GGTCTACGCG
ATCCTCTTCG CCTCGCCATT GCTGATCACG GTGCTGTCGA TCCCGATCCT GGGCGAAACC
GTGCGCCTGC GTCGCTGGCT GGCGGTCATC GTGGGCCTGA TCGGGGTGGT GGTGGTGCTG
CGCCCCGGCG CGGTGGATCT GACCCTGGGC CATGTCGCCG CCCTGACCGC GGCGGTCGGT
GGCGCGCTCG CCTCGGTGGT GGTGCGCAAG GTGGGGCGGG AGGAGCGCTC GGTCGTGCTG
CTCCTCTATC CGATGGTGGC GAATTTTGTG CTGATGGCCT GCCTGATGCC GTTCTTCTAT
CGCCCGATGC CCGTGGGGGA CCTGGCCGCG GTGGGGCTGA TGGCCGCCCT CGGCTTCGGG
GCGAGCCTGC TGCTCATCGC CGCCTACCGC GCCGGGGAGG CCGCGATCAT CGCGCCGATG
CAGTATTCCC AGATCCTCTG GGCGTCGCTC TTCGGCTTCG TGCTCTTCGG CGAGGGGATC
GACCTGAACA CCGCCCTCGG GGCCGCCATC GTGATCGCCT CCGGCCTCTA TATCGTCGCG
CGAGAAAGCC GCTCCAGCGT ATCGGACAAC ATGCCCGTCC TGCGCACCCG GTCCCGGCCC
GAAACCGGGA CCATGCCGCG GGTCGGCCCG CTGCTGCCGG ACACGGCCAA ACCCGACCTG
CCCGGCGACA AGCCCGACGC GGATTAG
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| Protein sequence | MTLSSNLKGA LLGLAAFAVF AVHDVVVKTL GGSYTPFQIV FFGVLFSFPL TTVMMMREKA
HGNLRPRHPW WIALRTGAAV ITGLTAFYAF TVLPLAQVYA ILFASPLLIT VLSIPILGET
VRLRRWLAVI VGLIGVVVVL RPGAVDLTLG HVAALTAAVG GALASVVVRK VGREERSVVL
LLYPMVANFV LMACLMPFFY RPMPVGDLAA VGLMAALGFG ASLLLIAAYR AGEAAIIAPM
QYSQILWASL FGFVLFGEGI DLNTALGAAI VIASGLYIVA RESRSSVSDN MPVLRTRSRP
ETGTMPRVGP LLPDTAKPDL PGDKPDAD
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