Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0067 |
Symbol | caiD |
ID | 5711689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 68339 |
End bp | 69085 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641265961 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001531417 |
Protein GI | 159042623 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000315563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGAGA CCACCCATGG TGACGGGCAG TGCGTGATCA CCCTGAACCG GCCGGACAAG GCCAATGCCC TGACCGCGCC CATGCTCGAA GCGCTGGAGC GCGCCCTGAT CGAGGCGGAG GCCGCCGGAC TGCGCGTTGT CGTGCTGACC GGGGCGGGCA AGGTGTTCAG CGCCGGGGCC GACCTGGAGG CGGCGCGCAA TGGTGGGCTG ACCACCCACC CGGTCTGGGA GCGGGTGTCG TCGCGCATCG CAGGCTATCC GGGGCTGACC GTGGCGGCGC TCAACGGGAC TTGCGCGGGG GGCGCGCTGG GCATGATGTT GGCTTGCGAC CTGCGGGTCG CGGTGCCGAC GGCCAAGGTG TTCTACCCCG TGCTGAAGAA CGGGTTCCTG CCGCAACCTT CGGACCCGCC GCGGTTGGCG GCGCTGTGCG GGGTGAGCCG GGCGAAGATG ATCCTGCTGG GCGGGGCCAA GGTGGCGGCG GAGACCGCCC TGTCCTGGGG CCTGTTCGAC CGGATCGCCG CGCCGGAGGA GTTGATGGAG GCGGTGGACG GCTTCACCGT CGATGCCAAG GGCGCATCGC CCGGCTTGCT GGCACAGATC AAGGCCCTGT GCCATGGCGA TCAACCCGGC CGCGACCGGC CCGGCCCCAG CCCGGCACCG GCGATGCAGC GGCACCCGCA GCCGCTGGGC ACAGAGGCGG TGTTCACCGC CTCGGCCCCG TCCGCGGAGC AGGACACGGG GCGCTAG
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Protein sequence | MIETTHGDGQ CVITLNRPDK ANALTAPMLE ALERALIEAE AAGLRVVVLT GAGKVFSAGA DLEAARNGGL TTHPVWERVS SRIAGYPGLT VAALNGTCAG GALGMMLACD LRVAVPTAKV FYPVLKNGFL PQPSDPPRLA ALCGVSRAKM ILLGGAKVAA ETALSWGLFD RIAAPEELME AVDGFTVDAK GASPGLLAQI KALCHGDQPG RDRPGPSPAP AMQRHPQPLG TEAVFTASAP SAEQDTGR
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