| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0058 |
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| Symbol | lolA |
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| ID | 5711680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 55941 |
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| End bp | 56645 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641265952 |
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| Product | outer membrane lipoprotein carrier protein |
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| Protein accession | YP_001531408 |
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| Protein GI | 159042614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000236321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCGGC ACCTGCGCAC CCCGCCCCAT GGGCGAAATC GCGCAGAGGT GAGCCGCCCG
CTATGGCATA GCAGCCCCGC CCCGCTTACC TCTGGGTGCA TGAACAGACG CCAGTTTACC
GCCCTCACCC TCGCCGGTCT CGCAACCCCC GGTCTCGCCC GGGCCGCGAG CCTGATCCCG
CTGCCCGAGA TCGCCGCCTA TCTGCGCGGC CTCGACCTTG TCCAGGCTCG CTTCACCCAG
CGCAATGCCG ATGGCTCGAC CTCCACCGGC ACGCTCTACC TGCGCCGCCC CGGCCGCGCA
CGGTTCGAAT ACGACCCACC TGCGGAGGTG CTGGTCATGG TCGGCGGCGG CACGGTCGCG
ATCTTCGACG CCAAGGGCGA TCCCACCCCC GAAAGCTACC CGCTGCGGCG CACCCCGCTG
AACGTGATCC TGTCGCGCGA GGTGGATCTC GAAGGCTCCG ACGCGATCTT CGGCCACCAA
CTGGACGGCG ATCTGACCAC CGTGCTCGCC CATGACCCCG CGCATCCGGA ATACGGCCGC
ATCGCCCTGC AATTCGCCGC CGATCCCGTG CGGCTGGCCC GCTGGGTCAT CGTCGGCGAG
ACCGGCGAGC AGACAGTGAT CGAGCTTGGC CCGCTGACCC GCCCGGCACA GCTGTCCTCC
AACCTGTTCA ACATTCCCGG CGAAACCAAC CGCCGCCGCA ACTGA
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| Protein sequence | MPRHLRTPPH GRNRAEVSRP LWHSSPAPLT SGCMNRRQFT ALTLAGLATP GLARAASLIP
LPEIAAYLRG LDLVQARFTQ RNADGSTSTG TLYLRRPGRA RFEYDPPAEV LVMVGGGTVA
IFDAKGDPTP ESYPLRRTPL NVILSREVDL EGSDAIFGHQ LDGDLTTVLA HDPAHPEYGR
IALQFAADPV RLARWVIVGE TGEQTVIELG PLTRPAQLSS NLFNIPGETN RRRN
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