Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0040 |
Symbol | |
ID | 5711662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 42375 |
End bp | 42662 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641265934 |
Product | protein of unknown function DUF1330 |
Protein accession | YP_001531390 |
Protein GI | 159042596 |
COG category | [S] Function unknown |
COG ID | [COG5470] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000083486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCAAGG GATACATCGT CGCGAGCATT CGCAGCAACG ACATGGAGAC GATCGGCCGC TTCGCCGCCG CCGCCGGTCC GGTGATCGCG GAGTACGGAG GGCGGGTGCT GGCGCGTGAC CCGCAGCCGG AGGTGCGCGA GGGAGCCGAT ACGGGGATTG CCGTTCTGGT GGAGTTCGAC GACGTGGCGA CAGCGCGCCG GTTCTACGAG TCCGCAGGGT ACACGGCGGC GAAGGCGATC CGCGAGGCGG TGGCCGAGAC CGATCTGCGC ATCGTGACTG GGCTCTGA
|
Protein sequence | MPKGYIVASI RSNDMETIGR FAAAAGPVIA EYGGRVLARD PQPEVREGAD TGIAVLVEFD DVATARRFYE SAGYTAAKAI REAVAETDLR IVTGL
|
| |