| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0038 |
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| Symbol | |
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| ID | 5711660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 40432 |
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| End bp | 41118 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641265932 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001531388 |
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| Protein GI | 159042594 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000503825 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCACTT TGAGAAAGAT CCTGCTTGTC GACGATGACG AGGACCTGCG CGAGGCGTTG
TCGGAACAAC TCGTGATGAC CGAGGATTTC GACGTGTTCG AAGCCGGTTC CGGCGCCGAG
GCGATGGAAA AGACCAAGGC CGGGCTCTAT GACCTGGTGA TCCTCGATGT GGGCCTGCCC
GACACCGACG GGCGCGAGTT GTGCCGCCTG ATGCGCAAGC AGGGGGTGAA ATGCCCGGTG
CTGATGCTGA CGGGCCATGA CAGCGACGCC GACACCATCC TCGGGCTGGA TGCCGGGGCA
AACGATTATA TCTCCAAGCC GTTCAAGCTG CCGGTGCTGC TCGCCCGGAT CCGCGCCCAG
CTGCGCCAGC ACGAGCAATC CGAGGACGCG GTCTTCACCC TGGGGCCGTA CACCTTCAAA
CCTGCCATGA AGCTGCTGGA GACCGAGGAC GAGCGCAAGA TCCGCCTGAC CGAGAAGGAA
ACCAACATCC TCAAGTTCCT CTACCGCGCC ACCGAAGGCG TGGTCGCCCG CGACGTGCTG
CTGCACGAGG TCTGGGGCTA CAATGCGGGC GTGACGACCC ACACGCTGGA GACCCATATC
TACCGCCTGC GCCAGAAGAT CGAGCCCGAT CCCTCCAACG CCCGGCTGCT GGTCACGGAA
TCCGGCGGCT ACCGGCTTGT GGCCTGA
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| Protein sequence | MATLRKILLV DDDEDLREAL SEQLVMTEDF DVFEAGSGAE AMEKTKAGLY DLVILDVGLP
DTDGRELCRL MRKQGVKCPV LMLTGHDSDA DTILGLDAGA NDYISKPFKL PVLLARIRAQ
LRQHEQSEDA VFTLGPYTFK PAMKLLETED ERKIRLTEKE TNILKFLYRA TEGVVARDVL
LHEVWGYNAG VTTHTLETHI YRLRQKIEPD PSNARLLVTE SGGYRLVA
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