Gene Dshi_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0033 
Symbol 
ID5711655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp36716 
End bp36907 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content68% 
IMG OID641265927 
Productprotein of unknown function DUF343 
Protein accessionYP_001531383 
Protein GI159042589 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0508144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000474909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCCG ACGAGATCGA GGCGGAGTTC GACCGCCACA TGCTGGAATC GCTTGTCTGC 
CCGGTGACCC GCGCGCCCCT GACCTACGAC GCCGAGGCGC AGGAGCTGAT CTCCCGCGCC
GCCCACCTGG CCTTCCCGAT CCGCAACGGC ATCCCGGTGA TGATCGAGGA CGAGGCGCGC
AAGCTCGACT GA
 
Protein sequence
MSADEIEAEF DRHMLESLVC PVTRAPLTYD AEAQELISRA AHLAFPIRNG IPVMIEDEAR 
KLD