| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0031 |
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| Symbol | lpxK |
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| ID | 5711653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 34226 |
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| End bp | 35239 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641265925 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_001531381 |
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| Protein GI | 159042587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00249261 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCCGC CCGGCTTCTG GCACGCGCCC CCCGACGCGC TCGGCTGGCG CGCCCGGGCG
CTGGCCCCGC TGGGCGCGCT CTACGCCGCC GCCACCGCCC GGCGCGTGGC CCGGCCGCCC
GCCCACCGGC CCGGCATCCC GGTGATCTGC GTCGGCAACA TCAATGCGGG CGGCACCGGC
AAGACCCCGA CCGTGATCGC GCTGCAGATG ATCCTCGCCG CTCGTGGCAT CGCCGCCCAT
GTGGTCAGTC GCGGCTATGG CGGGCGGCTG GAGGGCCCCG TCGCCGTGGA CCCGCGCCGC
CACGATGCGG CCGAGGTGGG AGACGAGCCG CTGCTGCTCG CCGCCTTCGG TCCCACCTGG
GTCGCCCGGG ACCGCGCGGC AGGGGCACGG GCGGCGGAAG GCGCAGGCGC CCAGGCGATC
CTGCTCGATG ACGGGTTCCA GAACCCGACG CTCGCCAAGG ATCTCTCCCT CGTGGTGGTG
GATGCCCAAC GGGGCTTCGG CAATGGCCGG GTCATCCCCG CGGGCCCGCT GCGCGAACCC
GTGGCCCGCG GCCTCGCCCG CGCCGACCTG CTCCTGACCA TCGGCCCCCC CGCGGCGCAA
GCCCGCTTCG ACGCGCTCTG GGGGCCTGCC ACCGTCACCC TGCCCCACCT GCGCGGCGCG
CTCACCCCGC TGCAGACCGG CATGCGGTGG GAGGGCCTGC GCGCCGTCGC CTTCGCCGGG
ATCGGCCATC CGCAGAAATT CTTCGACACC CTGCAGGACC AGGGCGTGAT CCTCTGCGCC
ACCCACCCGC TGGACGACCA CCAACCGCTG GACGCGCGGC TGATCACCCG GCTTCTGGCC
GATGCCAAGG CCCAGGGCGC GCAACTCGTG ACCACCGAAA AGGACGCCGT CCGCCTGCCG
GCCGAGCTGC GCGGCCAGGT CCTCAGCCTG CCCGTCCGGC TCGCGCTTGC CGACGACACC
GCCCTGACCG CGGCCCTCGA CACGCTGTTT CCGAACGCAA CACGCCGCTT GTAA
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| Protein sequence | MRPPGFWHAP PDALGWRARA LAPLGALYAA ATARRVARPP AHRPGIPVIC VGNINAGGTG
KTPTVIALQM ILAARGIAAH VVSRGYGGRL EGPVAVDPRR HDAAEVGDEP LLLAAFGPTW
VARDRAAGAR AAEGAGAQAI LLDDGFQNPT LAKDLSLVVV DAQRGFGNGR VIPAGPLREP
VARGLARADL LLTIGPPAAQ ARFDALWGPA TVTLPHLRGA LTPLQTGMRW EGLRAVAFAG
IGHPQKFFDT LQDQGVILCA THPLDDHQPL DARLITRLLA DAKAQGAQLV TTEKDAVRLP
AELRGQVLSL PVRLALADDT ALTAALDTLF PNATRRL
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