| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0027 |
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| Symbol | alkB1 |
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| ID | 5711649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 30653 |
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| End bp | 31807 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641265921 |
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| Product | alkane 1-monooxygenase |
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| Protein accession | YP_001531377 |
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| Protein GI | 159042583 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.114145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.114958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CCGACACCGC CTCCATTCCC CCCGCCCGCA TGGCCCGCCT GACCCGGGCC
CTGCCCTTCT GGCTGTCGCT GGGCCTGTTC CCGGCGATCC TGCTGGCGGC GGAATATGGC
GGCTGGGCGC TGCTGCTGCC GCCCCTGGCC AGTTGGGGGC TGTTTTCCCT GCTGGATGCG
CTCGCGGGGC TGGAGACCGG CAATGCCGAC ACCGGCACGC CCGAAGAGGC ACTCGGCTGG
TACCGGGCCA TCACCCTGGC ATGGTTCCCG CTCCAGGCGG CGATGCTGAT CTGGCTGCTG
GCCACCGTGC CCGCCGCCGC CCATCTGGGC GCGGCCGAGA AGGTCGGCGT GTTCTTCGGC
ATGGGCGTGG CCTCCGGCAC GGTCGGGATC ACCTATGCGC ATGAGCTGAT GCACCAGAAG
AACCGGCTGG AGCGGTGGCT GGGCGACCTG CTCATGGCCT CGGTGCTCTA CGGTCATTTC
CGCTCAGAAC ACCTGCTGGT ACACCACCGC TACGTGGGCA CGCCCCGCGA CCCGGTCACC
GCGCGTTACA ACGAGGGCTT TCACCGGTTC TATCCGCGTG TGCTGTGGCA ATGCCTGGCC
TCGGCCTGGC GGGCGGAGGC GGCGATGCTC GCCCGCCGCA ACCGCCCTGT CTGGCACCCG
GCCAACCCGT TCTGGCGCTA CGCCGCGCTG CAGGCAGGCT GGCTCGCGCT CGCCTTCGCC
CTGGGGGGCT CATCGGGCGT TGCCCTCTTC GCCGTGCAGG CGGCCACCGC CATCTGGCAG
CTCGAACTGG TCAACTACGT GGAACATTAC GGCCTGACCC GGAAACATCT GGGCGACGGG
CGCTACGAGC ATGTGCAGCC GCGCCATTCC TGGAACGCCG CGCAGAAGGC GTCGAACTGG
CTGCTGATCA ATTTGCAGCG CCATTCCGAC CACCATTACA AGCCCGACCG CCGCTTCCCC
CTGTTGCAGA CCTACGGACC CGAGGAGGCA CCGCAACTGC CCTTTGGCTA TCCGGTGATG
ACCATGGCCG CCATGGTCCC GCCCCTCTGG CGCCGGATCA TGAACCCCCG CGTGCGCGCC
TGGCGTCGGC AATACTACCC CGAGATCGAG GATTGGGGCC CCTACAAGCG CGCCGAAACG
CCGCTGCCAC GCTGA
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| Protein sequence | MSTPDTASIP PARMARLTRA LPFWLSLGLF PAILLAAEYG GWALLLPPLA SWGLFSLLDA
LAGLETGNAD TGTPEEALGW YRAITLAWFP LQAAMLIWLL ATVPAAAHLG AAEKVGVFFG
MGVASGTVGI TYAHELMHQK NRLERWLGDL LMASVLYGHF RSEHLLVHHR YVGTPRDPVT
ARYNEGFHRF YPRVLWQCLA SAWRAEAAML ARRNRPVWHP ANPFWRYAAL QAGWLALAFA
LGGSSGVALF AVQAATAIWQ LELVNYVEHY GLTRKHLGDG RYEHVQPRHS WNAAQKASNW
LLINLQRHSD HHYKPDRRFP LLQTYGPEEA PQLPFGYPVM TMAAMVPPLW RRIMNPRVRA
WRRQYYPEIE DWGPYKRAET PLPR
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