Gene Dshi_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0022 
Symbol 
ID5711644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp26400 
End bp26954 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content74% 
IMG OID641265916 
Producthypothetical protein 
Protein accessionYP_001531372 
Protein GI159042578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0874338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.315714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CCTTTTGCAC CCGCGGTCTC CGCGCCGCCG CCGCGCTCCT GTTGTCGGCG 
GTGATCGGGG CGACCAGCCT GGCCGCCACC GCCAGCCCCG CCCGCGCGCT GGAGCGTGAA
ACCCTCGGGC AGCTGCTCTT CGGGGCGGCG GCCATCGCGC TTGCCGCCAA GGTCTATAAC
GACCGGGAGG ACCGCAAGGC CCGCGAACGG GCCGCCCGGG CCGCCCCGCC CCCGGTGCAG
GTGGTCGAGG CCGACCGCTG GCGCGCTTAT GGTCCCCGGG GGCGGGTAGT CTATGGTCCC
GGCACCCGGC CCGGGCAGGC GTTCGAGGGG GCGGGGACCC GGCGCGAGGC GCTGACTCGC
CGCATCCAGT GCCAACGAAA GCTGCAGACC GAGACCGGCT GGGTGAAGTT CTACAGCCAG
GCCTGCCTCG ACCGGGTGGG GGCGGATGTG GACGTGCCCC AGACCTGCCT GCGCCAGCGT
TGGGCGCAGG GGCGCTGGGT GCAGTATTTC AGCCGGGGCT GCCTGCGCCG CTTCGGCATC
GTGGACGCGG TGTGA
 
Protein sequence
MTQTFCTRGL RAAAALLLSA VIGATSLAAT ASPARALERE TLGQLLFGAA AIALAAKVYN 
DREDRKARER AARAAPPPVQ VVEADRWRAY GPRGRVVYGP GTRPGQAFEG AGTRREALTR
RIQCQRKLQT ETGWVKFYSQ ACLDRVGADV DVPQTCLRQR WAQGRWVQYF SRGCLRRFGI
VDAV