Gene Dshi_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0014 
Symbol 
ID5711592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp14693 
End bp15271 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID641265908 
Producthypothetical protein 
Protein accessionYP_001531364 
Protein GI159042570 
COG category[S] Function unknown 
COG ID[COG3222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.578692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGA CGCTGGTGGT GATGGTCAAG GAGCCGCGCC CGGGCCGCGT GAAAACCCGT 
CTGGGGCGCG AGATCGGGAT GGTCGGGGCG GCCTGGTGGT TCCGGCACCA GGGCGCGCGC
CTGATCCGGC GGCTGCGCGA TCCGCGCTGG GAGCTGGTGC TGGCGGTCTC GCCCGATACC
GAGGGGCTGG CCAGCCGGGT CTGGCCCGCC GACCTGCCGC GCTGGCCGCA GGGACGGGGC
GATCTGGGCG ATCGGATGGG GCGGGCGTTG CGCGGGTTCG GGCCGGGGCC GGTGGCGGTG
ATCGGCGCGG ATATTCCCGG CATCGACCGC GCCCGCATCA CTGAGGCCTT CGCCGCGCTG
GGCCGCGCCG ACGCTGTGCT GGGGCCCGCG CCGGACGGCG GCTACTGGCT GATCGGCTGG
GCGGGGCGCC GCGCGCTGCC AGCCGCCACC TTCGAGAGCG TCCGCTGGTC CACCGAACAC
ACCCGCGCCG ATACGATCCG GTCGCTCGGC GATTGCCGGA TCGCCCACGT GGCGGAATTG
CAGGATGTGG ACACAGTCGA AGATTTGCGC CGGGTTTGA
 
Protein sequence
MRPTLVVMVK EPRPGRVKTR LGREIGMVGA AWWFRHQGAR LIRRLRDPRW ELVLAVSPDT 
EGLASRVWPA DLPRWPQGRG DLGDRMGRAL RGFGPGPVAV IGADIPGIDR ARITEAFAAL
GRADAVLGPA PDGGYWLIGW AGRRALPAAT FESVRWSTEH TRADTIRSLG DCRIAHVAEL
QDVDTVEDLR RV