Gene Dshi_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0010 
Symbol 
ID5711588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp12121 
End bp12642 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID641265904 
Productprotein of unknown function DUF305 
Protein accessionYP_001531360 
Protein GI159042566 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC ACGACACCGC CCACACCGGC GCGCACAAAT CCGGCACCGG CGCGAATTAC 
GGCCGGTTCC TGGCCATGAT CGCTACCTCG ACCGCAGTGA TGTACGGGCT GATGTATCTC
AACACCTATG CGCTCGACCA CGTGTTCTTC TCGCAGACGC GGGCCTGGAT GGCGCTCTAC
ATGGGCGGGG CCATGGCGGT GGTGATGCTG GCCTTCATGC TGGGGATGTA TTCCAACCGC
CGCGCCAATA TCGCCGTGTT CACGGGCGCG GTGCTCGCCT TCGCGGCGGG GGTCTTCCTG
GTGCGGTCCC AGGACACCGT GGGCGACGTG GCCTGGATGA AGGCGATGAT CCCGCACCAT
TCCATCGCCA TCCTGACCAG CGAACGCGCG ACGCTGTCGG ACCCCCGCGT GCGCGCCCTG
GCCGACGAGA TCATCGCCAC CCAGCGCGCC GAGATCGCCG AGATGAAGCG CTACATCTCG
CAGATCGAGA CCGCCGCGGA GGCAAGTGAC CCTGCGTCGT GA
 
Protein sequence
MTQHDTAHTG AHKSGTGANY GRFLAMIATS TAVMYGLMYL NTYALDHVFF SQTRAWMALY 
MGGAMAVVML AFMLGMYSNR RANIAVFTGA VLAFAAGVFL VRSQDTVGDV AWMKAMIPHH
SIAILTSERA TLSDPRVRAL ADEIIATQRA EIAEMKRYIS QIETAAEASD PAS