Gene Dshi_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0005 
Symbol 
ID5711757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp8220 
End bp8924 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID641265899 
Producthypothetical protein 
Protein accessionYP_001531355 
Protein GI159042561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCGG GTCCGCGCGG GACCGGGGTA ATTTGCGCGG GTGGCAGGGG CCGGTTCTGT 
TGGTTGGGGG TGCGCGTGGC TTTGAGCATT GCGGTGGGGA CCAGGTCGCT GGACGTGGTG
CCGTTCGAGC GGTTCGATGA TTTCAGGGGG TTTTCGGCCC ATTGGGCGGC GCGATTGGTG
CCCGGCCCGG CGGTCTTGAA CCACTGGGAT CATGGTGCGC GGGCCTGGCG GGCGCCGCCG
CTGGAGGCGC CGATCACCCT GCGGCCCGCC GTGCAGTGCC TGGTGAGCGA CGGGTTCGGG
GTGCGCGACG GGGCGGCGGA GCGGGCGATG ATGGCGCGGA TCTGCGACGG GCTGGGGGTG
TCTGGCGCGG CGCTGCATGC GGCGGTGGAG GCGGAGCTGC CGCCCGCGCG GTTCGCGGTG
GACACCCATG CCGCCCTGAC CGCCGAGCAG CGGGCGGCCG GGTCCTGGGA GGTGCTCGGC
CAGGCCCATT TCGAGCATCT GGTGCTGCGT GGGGCGGTGG GGCGGCTGGG GGATTGGATC
CTGGTCTCGG TGGCGGTGGA TTTCACGCTC TCGGCGCGGA CGGTGGCGCG GGCGTTGCGG
GGCCCGGACG GGCCGGGCGG GGCGCTGACC GAGCGGAGGC CGGACGACCT GCGCGCCCGG
TCGGGGGAGG CGGAGCGTCA TGCAGGTTCG CGCGCGGGGC GGTAG
 
Protein sequence
MLAGPRGTGV ICAGGRGRFC WLGVRVALSI AVGTRSLDVV PFERFDDFRG FSAHWAARLV 
PGPAVLNHWD HGARAWRAPP LEAPITLRPA VQCLVSDGFG VRDGAAERAM MARICDGLGV
SGAALHAAVE AELPPARFAV DTHAALTAEQ RAAGSWEVLG QAHFEHLVLR GAVGRLGDWI
LVSVAVDFTL SARTVARALR GPDGPGGALT ERRPDDLRAR SGEAERHAGS RAGR