| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0002 |
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| Symbol | gltB |
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| ID | 5711754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1782 |
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| End bp | 6320 |
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| Gene Length | 4539 bp |
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| Protein Length | 1512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641265896 |
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| Product | glutamate synthase |
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| Protein accession | YP_001531352 |
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| Protein GI | 159042558 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGT ATGACGCAAA CTGGGCCGCC GCCGAAGAGG CCAAGCGCAA GTGGCTGGCC
GAAAACGGCA TGTATTCGGA GCAAGAAGAG CACTCCTCCT GCGGCGTGGG CCTCGTGGTC
AACGTCAAGG GCGAGAAGTC CCGCGCCGTG GTCGAGGCGG GCATAACCGC CCTGAAGGCG
ATCTGGCACC GGGGCGCCGT GGATGCGGAC GGCAAGACCG GCGACGGGGC GGGCATCCAC
GTGCAGATCC CGGTCGAGTT CTTCTATGAC CAGGTGCGCA ATACCGGCCA CGAGCCGGAG
ATGGACCAGC TGATGGCGGT GGGCCAGGTG TTCTTGCCGC GCACCGATCA CGGGGCGCAG
GAGACCTGCC GGACCATCGT GGAATCCGAG GTCCTGCGCC TGGGCTATCA CATCTATGGC
TGGCGGCATG TGCCGGTGGA CATCTCGTGC CTGGGCGAGA AGGCCAACGC GACCCGGCCC
GAGATCGAGC AGATCATCAT TTCCAACTCC AAGGGCGTGG ACGAGGAAAC CTTCGAGCGC
GAACTGTACG TGATCCGCCG CCGGATCGAG AAGGCGGCGG CGGCGGCGCA GGTTGCGGGT
CTCTATATCT GTTCGCTGTC GTGTCGGTCG ATCATCTACA AGGGCATGAT GCTGGCCGAG
CAGGTGGCCG AGTTCTATCC CGACTTGCAG GATGCGCGCT TCGTGTCGGC CTTCGCCATC
TATCACCAGC GCTATTCCAC CAACACCTTC CCGCAGTGGT GGCTGGCGCA GCCGTTCCGG
ATGCTGGCCC ATAACGGCGA GATCAACACG CTCAAGGGCA ACATCAACTG GATGAAGAGC
CACGAGATCC GCATGGCCTC GGCGGCGTTT GGCGAGATGG CCGAGGACAT CAAGCCGATC
ATCCCGGGGG GGTCGTCGGA TTCGGCGGCG CTGGACGCGG TGTTCGAGGT GATGGTGCGC
TCGGGCCGGA ACGCGCCCAT GGCCAAGACC CTGCTGGTGC CGGAATCCTG GTCCAAGCAG
GCGGTGGAGC TGCCCCAGGC CTGGCGCGAC ATGTATTCCT ACTGCAACTC GGTGATGGAG
CCGTGGGACG GCCCCGCTGC GCTGGCCATG ACCGACGGGC GCTGGGTCTG CGCCGGGCTG
GACCGGAACG GGTTGCGTCC GATGCGGTAC GTGGTGACCG GCGACGGGCT GGTCATCGCG
GGGTCCGAGG CGGGCATGGT CCCGGTGAAC GAGGCGAACC TGGTCGAGAA GGGCGCGCTC
GGCCCCGGGC AGTTGCTGGC CGTGGACATG GAAGAGGGGC GGCTTTTCCA TGACACCGAG
ATCAAGGACA AGCTCGCGGC CTCCCAGCCG TTCGGCGAGT GGGTGGGCAA GATCACCGAT
CTCGACAGTG CCCTGGCCAA GGTGACCGAG GTGGCGATCC ACGAGGGGGG CGAGCTGCGC
AAGCGGCAGA TCGCGGCGGG CTATTCCATC GAGGAGCTGG AGCAGATCCT CGTGCCCATG
GCCGAGGACG GCAAGGAGAC GCTGGCGTCG ATGGGCGACG ACACGCCGCC CGCGGTTCTG
TCGAACCAGT ACCGGCCCCT GAGCCATTTC TTCCGGCAGA ATTTCAGCCA GGTGACCAAC
CCGCCGATCG ATTCCTTGCG CGAATACCGG GTGATGAGCC TCAAGACCCG GTTCGGCAAC
CTCAAGAACG TGCTGGACGA GACCTCCGAG CAGACGGAGA TCCTGGTGCT GGAGAGCCCG
TTCGTGGGCA ATGCCCAGTT CGAGCGTCTG ATCGCCCAGT TCGGGGAGTC GGTGTGCTAC
ATCGACTGTA CCTTCCCGGC GGGCAAGGAT CGCGACACCC TGCGCCGCGA GCTCGGGCGC
ATCCGGGCCG AGGCCGAGGA TGCGGTGCGC TCCGGCGCGG CCCATATCGT GTTGAGCGAC
CTGGGCCAGT CCGAGGACCG GGTGCCGATG CCGATGATCC TGGCGACCTC CGCGGTGCAT
AGCTGGCTGA CGCGCAAGGG GCTGCGGACG TTCTGCTCGC TGAACGTGCG GGCGGCGGAA
TGCGTGGACC CGCATTATTT CGCCGTGCTG ATCGGCTGCG GGGCGACCAC GGTGAACGCG
TATCTCGCCG AGGACAGCCT GGCGGACCGG ATCCGGCGCG GGCTGCTCGA CTGTACGCTG
ACCGAGGCGG TGGCGCGGTA TCGCAATGCC ATCGACCAGG GGTTGTTGAA GATCATGGCG
AAGATGGGGA TCTCGGTGAT CTCGTCGTAC CGCGGGGGTC TGAACTTCGA GGCGGTGGGG
CTGAGCCGCG CCATGGTGGC GGAGTATTTC CCCGGCATGA CCAGCCGGAT TTCCGGGATC
GGGACGACGG GGATCCAGAC CAAGCTCGAA GAGGTGCATG CGCGCGGCTG GCGCGGGGGG
CAGGATGTGC TGCCCATCGG CGGGTTCTAC AAGTCGCGGC GGTCGGGCGA GAAGCACGCC
TGGGAAGCGC AGACGATGCA TCTGATGCAG GCGGCGTGCA ACCGGTCCTC CTATGAGCTG
TGGAAGCAGT ATTCCAAGGC GATGCAGGCC AACCCGCCGA TCCATCTGCG CGATCTGCTG
GCGATCTCGC CGCTCGGCGC GCCGGTGCCC ATCGAGGAGG TGGAGAGCGT CACCGCGATC
CGCAAGCGGT TCGTCACGCC GGGGATGTCC CTGGGCGCGC TGAGCCCGGA GGCGCACAAG
ACCCTGAACG TGGCGATGAA CCGGATCGGC GCGCGATCCG ACAGCGGCGA GGGCGGGGAG
GATCCGGCCC ATTTCGTGCC CGAGCCCAAT GGCGACAACC CGTCCGCGAA GATCAAGCAG
GTGGCCTCGG GGCGGTTCGG GGTGACCGCC GAGTATCTCA ACCACTGCGA GGAGCTGGAG
ATCAAGGTCG CCCAGGGTGC CAAGCCCGGG GAGGGCGGAC AGTTGCCGGG GATGAAGGTC
ACCGACCTGA TCGCGCGGTT GCGGCATTCG ACCAAGGGTG TGACCCTGAT CTCCCCGCCG
CCGCATCACG ACATCTACAG CATCGAGGAC CTGGCGCAGC TGATCTACGA CCTCAAGCAG
ATCAACCCGC GCTGCAAGGT GACGGTGAAG CTGGTGGCGT CGTCCGGCGT CGGCACCATC
GCCGCCGGTG TGGCCAAGGC CAAGGCGGAC GTGATCCTGA TCTCGGGCCA TAATGGCGGC
ACAGGGGCCT CGCCGGCCAC CTCGATCAAA TACGCAGGTC TGCCCTGGGA GATGGGCCTG
ACCGAGGCGC ATCAGGTGCT GGCGATGAAC AACCTGCGCG ACCGCGTGAC CCTGCGCACG
GATGGCGGTC TGCGCACCGG GCGCGACATC GTCATGGCCG CGCTGATGGG GGCCGAGGAA
TACGGCATCG GCACCGCGGC GCTGATTGCC ATGGGCTGCA TCATGGTGCG CCAGTGCCAG
TCCAACACCT GCCCCGTAGG GGTCTGCACC CAGGACGAGG AGCTCCGCGC CAAGTTCACC
GGCAACGCCG ACAAGGTGGT CAACCTGATC ACCTTCTATG CCCAGGAGGT GCGCGAAGTG
CTCGCCGCCA TCGGGGCGCG GAGCCTTGAC GAGGTGATCG GGCGCGCGGA TCTCTTGCGC
CAGGTCAGCC GCGGCTCGGC GCATCTGGAC GATCTCGACC TCAATCCGCT GCTGATCTCG
GTGGATGGGG CGCAGCATAT CGTCTACGAC CGCAACAAGC CGCGCAACCC GGTGCCCGAT
ACGCTGGACG CGCAGATCGT CTCGGACGCG GCGCGGTTCC TCAAGGATGG CGAGAAGATG
CAGCTGTCCT ATGCGGTGCA GAACACGCTG CGGACCATCG GGACGCGCAC GTCGAGCCAT
ATCGTCACCA ATTTCGGGAT GCGCAACGCG CTCCAGCCCG ATCACCTGAC GGTGAAGCTG
GAGGGATCCG CGGGGCAGTC GCTCGGGGCG TTCGGCGCGC CGGGGCTGAA GCTGGAGGTT
TCGGGCGATG CCAACGACTA CGTGGGCAAG GGTCTGTCCG GGGCGACGGT GGTGGTCAAG
CCGGTGCTGG GCTCGCCGCT CAAGGCGGAT GAGAACACGA TCATCGGCAA CACGGTGCTC
TACGGTGCGA CCGACGGCTA TCTCTTCGCC GCGGGACGGG CGGGCGAGCG GTTCGCCGTG
CGCAACTCCG GCGCGAAGGT GGTGATCGAG GGCTGCGGTT CGAACGGGTG CGAATACATG
ACCGGCGGTG TGGCGGTGAT CCTGGGCGAG ATCGGCGCGA ATTTCGGCGC GGGCATGACC
GGGGGGATGG CCTATCTCTA TGACCCTGCG GGCCGCGCGC CGGACATGAT GAACATGGAG
ACGCTGGTGA CCTGCCCGGT GACGGTGGAT CACTGGGAGG GCCAGCTCAA GGGCCTGATC
GAGCGCCACC TGGCGGAGAC CGGAAGCCGC AAGGCCGCCG ATATCCTGCA GCACTGGGAT
ATCGAGAAGG CCAACTTCCT GCAGGTCTGC CCGAAGGAGA TGCTGGTCCA TATCCCCGCG
CCGCTCGGCA TCGAGGACAG CGCGATCCCG GCGGAATAG
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| Protein sequence | MTKYDANWAA AEEAKRKWLA ENGMYSEQEE HSSCGVGLVV NVKGEKSRAV VEAGITALKA
IWHRGAVDAD GKTGDGAGIH VQIPVEFFYD QVRNTGHEPE MDQLMAVGQV FLPRTDHGAQ
ETCRTIVESE VLRLGYHIYG WRHVPVDISC LGEKANATRP EIEQIIISNS KGVDEETFER
ELYVIRRRIE KAAAAAQVAG LYICSLSCRS IIYKGMMLAE QVAEFYPDLQ DARFVSAFAI
YHQRYSTNTF PQWWLAQPFR MLAHNGEINT LKGNINWMKS HEIRMASAAF GEMAEDIKPI
IPGGSSDSAA LDAVFEVMVR SGRNAPMAKT LLVPESWSKQ AVELPQAWRD MYSYCNSVME
PWDGPAALAM TDGRWVCAGL DRNGLRPMRY VVTGDGLVIA GSEAGMVPVN EANLVEKGAL
GPGQLLAVDM EEGRLFHDTE IKDKLAASQP FGEWVGKITD LDSALAKVTE VAIHEGGELR
KRQIAAGYSI EELEQILVPM AEDGKETLAS MGDDTPPAVL SNQYRPLSHF FRQNFSQVTN
PPIDSLREYR VMSLKTRFGN LKNVLDETSE QTEILVLESP FVGNAQFERL IAQFGESVCY
IDCTFPAGKD RDTLRRELGR IRAEAEDAVR SGAAHIVLSD LGQSEDRVPM PMILATSAVH
SWLTRKGLRT FCSLNVRAAE CVDPHYFAVL IGCGATTVNA YLAEDSLADR IRRGLLDCTL
TEAVARYRNA IDQGLLKIMA KMGISVISSY RGGLNFEAVG LSRAMVAEYF PGMTSRISGI
GTTGIQTKLE EVHARGWRGG QDVLPIGGFY KSRRSGEKHA WEAQTMHLMQ AACNRSSYEL
WKQYSKAMQA NPPIHLRDLL AISPLGAPVP IEEVESVTAI RKRFVTPGMS LGALSPEAHK
TLNVAMNRIG ARSDSGEGGE DPAHFVPEPN GDNPSAKIKQ VASGRFGVTA EYLNHCEELE
IKVAQGAKPG EGGQLPGMKV TDLIARLRHS TKGVTLISPP PHHDIYSIED LAQLIYDLKQ
INPRCKVTVK LVASSGVGTI AAGVAKAKAD VILISGHNGG TGASPATSIK YAGLPWEMGL
TEAHQVLAMN NLRDRVTLRT DGGLRTGRDI VMAALMGAEE YGIGTAALIA MGCIMVRQCQ
SNTCPVGVCT QDEELRAKFT GNADKVVNLI TFYAQEVREV LAAIGARSLD EVIGRADLLR
QVSRGSAHLD DLDLNPLLIS VDGAQHIVYD RNKPRNPVPD TLDAQIVSDA ARFLKDGEKM
QLSYAVQNTL RTIGTRTSSH IVTNFGMRNA LQPDHLTVKL EGSAGQSLGA FGAPGLKLEV
SGDANDYVGK GLSGATVVVK PVLGSPLKAD ENTIIGNTVL YGATDGYLFA AGRAGERFAV
RNSGAKVVIE GCGSNGCEYM TGGVAVILGE IGANFGAGMT GGMAYLYDPA GRAPDMMNME
TLVTCPVTVD HWEGQLKGLI ERHLAETGSR KAADILQHWD IEKANFLQVC PKEMLVHIPA
PLGIEDSAIP AE
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